Deferribacter desulfuricans: DEFDS_0970
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Entry
DEFDS_0970 CDS
T01188
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
ddf
Deferribacter desulfuricans
Pathway
ddf00540
Lipopolysaccharide biosynthesis
ddf01100
Metabolic pathways
ddf01250
Biosynthesis of nucleotide sugars
Module
ddf_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ddf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
DEFDS_0970
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ddf01005
]
DEFDS_0970
Enzymes [BR:
ddf01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
DEFDS_0970
Lipopolysaccharide biosynthesis proteins [BR:
ddf01005
]
Core region
DEFDS_0970
BRITE hierarchy
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
BAI80442
UniProt:
D3PCW9
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All DBs
Position
complement(966564..967526)
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AA seq
320 aa
AA seq
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MIVLTGAAGFIGSVLLGYFNNQGITDILCVDRLGTKTKWKNLLGKKFIDFVDRDAFLENL
NTYKNIDYIIHIGACTDTTEFDLDYLLKTNYEYSKILFKFATEKQIPFIYASSAATYGAG
ENGYNDDENLIEYLRPLNPYGFSKQLFDLWVLKQNEKPPFWAGFKFFNVYGPNEYHKGRM
ASVIFHSFNQLKEAGIIKLFKSHKEGYNHGEQKRDFIYVFDVAKVIFFFYKNNTKSGIYN
LGTGQARTFNDLANNVIQNYGKGKIHYIDMPEDIRDKYQYFTEANMDKLKNAGYKDSFYT
LEEGVSDYTTNFLMKNYKIF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgatagttttaactggtgctgctggattcataggaagtgttttattaggttattttaat
aaccaagggattactgatatcttatgtgtggacagattaggtaccaaaaccaaatggaag
aatcttttagggaaaaagtttattgatttcgttgatagagatgcatttctggaaaatcta
aacacttacaaaaatattgactatattattcatattggtgcatgtacagataccacagaa
ttcgatctggattatctcttaaaaacaaattatgagtacagcaaaatactttttaaattt
gccacagaaaaacaaatcccatttatttatgcaagcagtgcagcaacatatggtgcaggt
gaaaatggttataatgatgatgaaaatttaatagagtatcttagacctttaaacccttac
ggattctcaaaacaattattcgacctttgggttttaaaacaaaacgaaaaaccacctttt
tgggcaggttttaaattctttaatgtttatggtccaaacgaataccataaagggagaatg
gcaagtgttatttttcattccttcaaccagttaaaagaagctggcataattaagcttttt
aaatcccacaaagaaggatataatcatggtgaacagaaaagagattttatttatgtcttt
gatgtggcaaaagtaatcttctttttctacaaaaataacacaaaatctgggatttataat
ttaggtacaggacaagctagaacctttaatgacctagcaaacaacgtaattcaaaattat
ggaaaaggaaaaatccactatatagacatgccagaagatattagagacaaataccaatat
tttacagaagctaacatggataaattaaaaaatgctggttacaaagatagtttttatact
ttagaagaaggagtttctgactacacaacaaattttttaatgaaaaactacaaaattttt
taa
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