KEGG   Dokdonia donghaensis: I597_0476Help
Entry
I597_0476         CDS       T04309                                 

Definition
(GenBank) Putative DNA ligase-like protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
ddo  Dokdonia donghaensis
Pathway
ddo03030  DNA replication
ddo03410  Base excision repair
ddo03420  Nucleotide excision repair
ddo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ddo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    I597_0476
   03410 Base excision repair
    I597_0476
   03420 Nucleotide excision repair
    I597_0476
   03430 Mismatch repair
    I597_0476
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ddo03032]
    I597_0476
   03400 DNA repair and recombination proteins [BR:ddo03400]
    I597_0476
Enzymes [BR:ddo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     I597_0476
    6.5.1.6  DNA ligase (ATP or NAD+)
     I597_0476
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     I597_0476
DNA replication proteins [BR:ddo03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    I597_0476
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     I597_0476
DNA repair and recombination proteins [BR:ddo03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     I597_0476
   NER (nucleotide excision repair)
    Other NER factors
     I597_0476
   MMR (mismatch exicision repair)
    Other MMR factors
     I597_0476
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID: ANH59407
UniProt: A0A0A2GW98
LinkDB All DBs
Position
560798..562441
Genome map
AA seq 547 aa AA seqDB search
MKLFAALIKTLDSTNKTNEKVKALAHYFKEAPDKDKVWTIAILSHRRPPRPVNTTLLREW
ASELANIPLWLFEESYHIVGDLAETIALVVPAAKESSDKSLTQFLEEMISLKRKTDEEKK
EHLFDNWANLNYYERFVFTKLITGSFRIGVSQKLMTRALSQATDIEEDVLAYKLMGDWKP
QTVTFHDLVIEEDASQEFSRPYPFYLAYAVEDEPAALGNVSDFLAEHKWDGIRSQTIFRN
GEVFIWSRGEELVTDKYPELEILKEHIPDGTVIDGELLPFYNGQIGTFNDLQARIGRKTV
SKKMLKEVPVIIKAYDILEWEGKDLRETAFAKRRSILESLYSNITDKGLPIGISETMEFD
SWEAMAQERERSREMRSEGLMIKRKDSPYRVGRKKGDWWKWKVDPLTIDAVLTYAMRGHG
RRSNLFTDYTFGLWNEDKTELVTFAKAYSGLTDAEFRKVDNWIKKNTLERFGPVRSVTPH
HVFEIAFEGIALSKRHKSGIATRFPRMLRWRHDKKIEDANTLEDLKGMIPSNEAEGQVVK
ESLPPTK
NT seq 1644 nt NT seq  +upstreamnt  +downstreamnt
atgaaactatttgcagcactcataaaaacccttgattctacaaataagactaacgagaag
gtaaaagcccttgcgcattattttaaggaagcgccagataaagacaaggtgtggacgatt
gccatcttatcgcaccgtcgccctccacgacctgtaaacacaaccttacttagggaatgg
gcaagcgagctggctaacatcccattatggctttttgaagagagctatcacatcgtgggt
gaccttgcagaaacgattgcacttgttgtacccgctgctaaggagtcatctgataagtcg
cttacacagtttctggaagaaatgatttcgcttaagcgaaaaactgatgaagagaaaaag
gaacatctctttgataactgggcaaatctaaattattatgagcgctttgtatttacaaaa
cttattacaggaagttttcgcataggtgtgagtcaaaagttgatgacgcgcgcattatca
caagcgacagatatagaagaagatgtgcttgcttataaattaatgggtgactggaaaccg
caaactgtcacctttcacgatctagttatcgaagaagatgcaagtcaagagttttctaga
ccctatccattttatcttgcctatgcagttgaagatgaacctgcggcgttaggtaatgtg
tcagactttcttgccgaacataaatgggacggtatacgctcacaaactatttttcgaaat
ggggaggtttttatctggagtcgcggtgaagagctggtgacagataagtacccagaactg
gagattctcaaagaacacataccagacggaaccgtcatagatggtgagttactgcctttt
tacaatggccagattggtacatttaatgatttgcaagcgcgcatagggcgtaagacggtg
agcaagaaaatgctcaaagaagtgcctgtaattatcaaagcttatgatattctagaatgg
gaaggaaaagacttgcgtgaaaccgctttcgcgaaaagaagatctatactcgaatcgtta
tatagcaatataacagataaaggtctgcctattggtatttcagagacaatggagtttgat
agttgggaagcgatggcgcaagaaagagaacgcagtagagagatgcgctcggaaggatta
atgattaagcgcaaagacagcccctatcgcgtaggtagaaaaaaaggcgactggtggaaa
tggaaagtagatccgctcaccattgatgctgtgctcacctatgcaatgcgtggtcacggt
agacgaagtaatttatttacagattacacctttggcttatggaatgaagataaaaccgag
ctcgttacttttgcaaaagcgtattcaggcctcacagatgccgagttcagaaaagtagac
aactggattaaaaaaaacacgttagaacgttttggcccagtgagatctgtaactccgcat
cacgtgtttgaaattgcctttgaaggtatagcgttatcaaaaagacataaaagtggtata
gccacgcgttttccaaggatgctacgctggcgacacgataagaagatagaagatgcaaat
acactagaggatttgaaagggatgattccgagcaacgaggccgaagggcaagttgtgaag
gaatctcttccgcccacaaaataa

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