Dickeya dianthicola: DDI_0506
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Entry
DDI_0506 CDS
T05141
Name
(GenBank) Lysyl-tRNA synthetase (class II)
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ddq
Dickeya dianthicola
Pathway
ddq00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DDI_0506
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ddq01007
]
DDI_0506
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ddq03016
]
DDI_0506
Enzymes [BR:
ddq01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
DDI_0506
Amino acid related enzymes [BR:
ddq01007
]
Aminoacyl-tRNA synthetase
Class II (A)
DDI_0506
Transfer RNA biogenesis [BR:
ddq03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DDI_0506
Prokaryotic type
Other AARSs
DDI_0506
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
ATO31674
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All DBs
Position
480464..481981
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AA seq
505 aa
AA seq
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MSEPQNQGAEQALDLNNELRARREKLASLRETGVAFPNDFRRDSVSDQLHAGYDEKDNEE
LEALGLEVNVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDDLPEGVYNEQFKKWDLGD
IVGARGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGLADQETRYRQRYLDLIANEES
RHTFRVRSQILAGIRRFMVGRDFMEVETPMMQVIPGGASARPFITHHNALDIDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGVSPRHNPEFTMMELYMAYADYKDLIELTESLFRT
LAQDVLGATEVQYGDQVFDFGKPFEKLTMREAIKKYRPETNVADLDSFDAAKAIAESIGI
KVEKSWGLGRIVTEIFEETAEAHLIQPTFITEYPAEVSPLARRNDQNPDITDRFEFFIGG
REIGNGFSELNDAEDQAQRFQDQVAAKDAGDDEAMFYDEDYVTALEHGLPPTAGLGIGID
RMVMLFTNSHTIRDVILFPAMRPQK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaccacaaaaccagggtgccgagcaggcgctggatcttaataacgaactcaga
gcgcgccgcgagaaactggcgtcgttgcgtgaaaccggcgtggctttcccgaatgatttc
cgccgtgacagcgtctcggatcaactgcacgccggctatgacgaaaaagacaacgaagag
ctggaagcgctgggtctggaagtgaacgtggccggccgtatgatgactcgccgtatcatg
ggcaaagcgtcgttcgtgacgctgcaagacgtgggcggccgcattcagctgtatgtggcg
cgcgacgatctgccggaaggcgtttataacgaacagttcaagaaatgggatctcggcgac
atcgtcggcgcgcgcggcaagctgtttaaaaccaaaaccggcgagttgtcgatccactgt
accgaactgcgtctgctgaccaaggcgctgcgcccgttgccggacaagttccacggcctg
gcggatcaggaaacccgttatcgtcagcgctatctggacctgatcgctaacgaagaatcc
cgccacaccttccgggtgcgttcgcagattctggccggtatccgccggttcatggtcggc
cgcgactttatggaagtggaaacgccgatgatgcaggtgatccccggcggcgcgtccgcg
cgtccgttcatcacccatcacaacgcgctggacatcgacatgtacctgcgcatcgcgcct
gaactgtacctgaagcgtctggtggtgggcggttttgaacgcgtgttcgagatcaaccgc
aacttccgtaacgaaggcgtgtcgccgcgtcacaaccctgagttcaccatgatggaactc
tacatggcgtacgcggactataaagacctgatcgaactgaccgagtcgctgttccgcacg
ctggcgcaggacgtgctgggcgcgaccgaagtgcagtacggcgaccaggtgttcgacttc
ggcaagccgttcgagaagctgaccatgcgtgaagccatcaagaaataccgcccggaaacc
aacgtggcggatctggatagcttcgacgcggcgaaagccatcgcggagtctatcggcatc
aaggttgagaagagctggggtctgggccgtatcgtcaccgagatcttcgaagaaaccgcc
gaagcgcacctgattcagccgaccttcatcaccgaatacccggcggaagtctcgccgctg
gcgcgccgcaacgaccagaacccggacattaccgatcgcttcgaattcttcataggcgga
cgtgaaatcggcaacggtttctccgagctgaacgatgcggaagatcaagcgcaacgcttc
caggatcaggtggctgcgaaagacgccggcgatgacgaagccatgttctacgacgaagac
tacgttaccgcgctggaacacggcctgccgccgaccgccggtctgggtatcggtatcgac
cgcatggtgatgctgttcaccaacagccacaccattcgcgatgtgatcctgttcccggcg
atgcgtccgcagaagtaa
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