Dickeya dianthicola: DDI_3550
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Entry
DDI_3550 CDS
T05141
Name
(GenBank) UDP-N-acetylmuramate--alanine ligase
KO
K01924
UDP-N-acetylmuramate--alanine ligase [EC:
6.3.2.8
]
Organism
ddq
Dickeya dianthicola
Pathway
ddq00550
Peptidoglycan biosynthesis
ddq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ddq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DDI_3550
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ddq01011
]
DDI_3550
Enzymes [BR:
ddq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.8 UDP-N-acetylmuramate---L-alanine ligase
DDI_3550
Peptidoglycan biosynthesis and degradation proteins [BR:
ddq01011
]
Precursor biosynthesis
Amino acid ligase
DDI_3550
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase
Mur_ligase_M
Mur_ligase_C
MurD-like_N
KdpC
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
ATO34718
LinkDB
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Position
complement(3663341..3664801)
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AA seq
486 aa
AA seq
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MNTQELAKLRSIVPEMHRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNAVTQQL
TDLGARIYFHHRPENVNEASVVVVSSAIAADNPEIIAAHEARIPVIRRAEMLAELMRFRH
GIAVAGTHGKTTTTAMVTSIYAEAGLDPTFVNGGLVKAAGTHARLGSSRYLIAEADESDA
SFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFLHNLPFYGHAVMCLDDAVIRELL
PKVGRHITTYGFSDDADVRVADYRQIGAQGLFTLARQGKPLLNVTLNAPGRHNALNAAAA
VAVATEEGIDDDAILRALARFQGTGRRFDFLGDFPLQPVNGKSGSAMLVDDYGHHPTEVD
ATIKAARAGWPDKRLVMIFQPHRYTRTRDLYDDFAHVLSQVDVLLMLDVYSAGEAPIPGA
DSRSLCRTIRGRGKIDPIMVPDVDTLPELLVQALQGDDLVLVQGAGNIGKLARRLAENRL
QAKTKD
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
gtgaatactcaagaactggcgaaactgcgttcaatcgtgcccgagatgcaccgcgtccgg
cacatccattttgttggcatcggtggtgccggcatgggcggtatcgccgaagtcctggct
aacgagggctatcagatcagcggttctgatctggcgcccaacgcggtaacgcagcaattg
accgatctgggcgcccggatttatttccaccatcgcccggaaaatgtgaacgaggcgagc
gtagtggtggtgtccagcgctattgcggcggacaacccggagattatcgcggcacatgag
gcccgtattccggtgattcgccgggcagagatgctggcagaattgatgcgctttcgtcat
ggcatcgccgtcgccgggacgcatggcaaaaccacgaccaccgcgatggtgaccagtatc
tacgcggaagcggggctggacccgacgttcgtcaacggcgggctggtcaaagccgcgggg
acgcacgcccggttggggtcgagccgttacctgattgcggaagcggatgagagcgatgcg
tcgttcctgcatttgcagccgatggtggcgattgtgaccaacatcgaagccgaccatatg
gatacgtatcagggcgattttgagaacctcaagcagacgttcatcaacttcctgcacaac
ctgccgttttacggccatgcggtgatgtgcctggatgatgcggtgattcgggaactgttg
ccgaaagtggggcgtcacatcaccacttatggtttcagcgacgatgcggatgtgcgggtg
gccgactaccggcagattggggcgcaggggctgtttacgctggcgcgtcagggtaaaccg
ctgctgaatgtgacgctgaacgcgccgggccgccacaatgcgctgaatgcggcggcggcg
gtcgcggtggcgacggaagaaggtattgatgacgacgcgattctgcgagcgctggcgcgt
tttcaggggacgggacgtcggtttgattttctgggcgacttcccgctacagccggtcaac
ggcaaaagcggcagcgccatgctggtggatgattacgggcatcacccgacggaagtggac
gccaccatcaaggcggcgcgcgctggctggccggataaacgcctggtgatgatttttcag
ccgcatcgctatacccgtacgcgggatctgtacgatgacttcgcgcacgtgctgtcccag
gtggatgtgctgctgatgctggatgtgtattcggccggcgaagcgccgattccgggggcg
gacagccggtcgctgtgccgcaccattcgcgggcgcggcaaaatcgacccgatcatggtg
ccggatgtggatacgctgcctgaactgctggtacaggcactgcagggcgatgatctggtg
ctggttcagggcgccggcaatattggcaaactggctcgtcggctggcggaaaaccgtctg
caggcgaagaccaaagattga
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