Deinococcus deserti: Deide_03120
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Entry
Deide_03120 CDS
T00880
Symbol
uvrB
Name
(GenBank) putative UvrABC system protein B (Excinuclease ABC, subunit B)
KO
K03702
excinuclease ABC subunit B
Organism
ddr
Deinococcus deserti
Pathway
ddr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ddr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Deide_03120 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ddr03400
]
Deide_03120 (uvrB)
DNA repair and recombination proteins [BR:
ddr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Deide_03120 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Deide_03120 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
AAA_22
AAA
Kinesin
DUF87
GldC-like
Motif
Other DBs
NCBI-ProteinID:
ACO45132
UniProt:
C1CZ94
LinkDB
All DBs
Position
complement(345954..347969)
Genome browser
AA seq
671 aa
AA seq
DB search
MLKVKSAFTPSGDQPTAIRSLVDGLDSGLRFQTLLGATGTGKTYTMAKVIEETGRPALIM
APNKILTAQLASEFREFFPDAAVEFFISYYDYYQPEAYVPGKDLFIEKDAAVNQEIERLR
HSTTRSLLTRRDTIVVASVSCIYGLGDPKEYTALNLILKKGDAVSRDEILGRLVNMQYER
NDIEMMPGRFRAKGEMIEVWPAYDEQPLRIELWGDDVERISVVHPLTGDRLADLDATVVY
PAKHYVSSAGNIERAIGTIQQELDERLDYFKSVGKLLEAQRLKERTLYDLEMLKVLGYCS
GIENYSRHIDGRAPGATPYTMLDYFPDDFVTFIDESHVTVPQIGGMANGDRARKQTLVDY
GFRLPSAMDNRPLNFQEFMDKTGQTVFVSATPGPFEREVSDAVSDQIIRPTGLVDPPVTV
RPINGQVEDLLGRIRERTAIGERTLVTTLTKRMSEDLTEYLLEKGVKARYMHSDIDSVER
QVIIRDLRLGHYDVLVGINLLREGLDLPEVSLVAILDADKPGFLRSERALVQTIGRAARN
VNGEVILYGDTITPAMQFAMEETARRREKQTSYNEAHGITPTTVIKGVRDVIRGEEQPEE
ISSATLGNDRDSLTAQLTDLELDMWQASEDLDFERAASLRDQIRAIEAKLQGKEFQQATV
PGQKVRRKGRR
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaggtcaaatccgcatttaccccgtctggcgaccagcccactgcgatccgttcc
ctggtggacggcctggacagcggcctgcgcttccagacgctgctgggagccaccggtacc
gggaaaacgtacaccatggccaaagtgatcgaggaaacggggcgccccgcgctgatcatg
gcgcccaacaagatcctgacggcccagctggccagtgaattccgggagttcttcccggac
gctgcggtggagtttttcatctcgtactacgactattaccagcctgaagcgtacgtcccc
ggcaaggacctgtttatcgagaaggacgcggcggtcaaccaggaaatcgagcggctgcgg
cattcaaccacccgcagcctgctgacccgccgggacaccatcgtggtggcctcggtgtcg
tgtatctacggtctgggcgaccccaaggaatacaccgcgctgaacctgattctgaaaaag
ggcgatgcggtcagccgcgacgagattctgggacggctggtgaacatgcaatatgagcgc
aacgacatcgagatgatgccaggccgcttccgggccaaaggcgaaatgatcgaggtgtgg
cccgcctacgacgagcagccgctgcgtattgagctgtggggtgacgacgtggagcgcatc
agcgtggtgcatccgctgaccggagaccggctggcagacctcgacgccacggtggtgtac
cccgccaagcactacgtgtccagcgccggaaatatcgagcgggccatcggcaccattcag
caggagctcgacgagcggctggactatttcaaatcggtgggcaagctgctcgaggcgcag
cgcctcaaggaacgcaccctgtacgacctggagatgctcaaggttctgggctactgctcg
ggcatcgagaactactcgcggcacatcgacggccgggcgccgggcgcgacgccctacacc
atgctggactacttccccgacgacttcgtcacctttatcgacgagtcgcacgtcacggtc
ccgcagatcggcggcatggccaacggggaccgcgccagaaagcagacgctggtggattac
ggcttccgcctgccctcggccatggacaaccgcccgctgaacttccaggagttcatggac
aagaccggtcagaccgtgttcgtctcggccacgccgggtcccttcgaacgcgaagtcagc
gacgccgtctcggaccagatcatccggccgaccggtctggtggacccgccggtcacggtg
cggcccatcaacgggcaggtagaagacctgctggggcgaatccgcgagcgcaccgccatc
ggcgagcgcaccctggtcaccaccctgaccaagcgcatgtccgaagacctgaccgagtac
ctgctggaaaaaggagtcaaggcgcggtacatgcacagcgacatcgactcggtggagcgt
caggtgattatccgggacctgcggctgggacactatgacgtgctggtcgggatcaacctg
ctgcgcgagggtctggacctgccggaagtctccctggtggccattctggacgccgacaag
cccggcttcctgcgcagcgagcgtgcgctggttcagaccatcgggcgcgccgcccgcaac
gtcaacggtgaagtgatcctctacggagacacgattaccccagccatgcagtttgcgatg
gaagagacggcccggcgccgtgagaaacagacatcctacaacgaagctcacggcatcacg
ccaaccaccgttatcaagggggtgcgtgacgtgatccgcggtgaggaacagcctgaggaa
atcagctctgccaccctgggcaacgaccgcgacagcctgaccgcgcagctcaccgacctg
gaactcgacatgtggcaggccagcgaggacctggacttcgagcgcgccgccagcctgcgc
gaccagatccgcgccattgaagccaagctgcagggcaaggagttccagcaggccaccgtg
cccggacagaaggtccggcgcaagggccgccgctag
DBGET
integrated database retrieval system