Devosia ginsengisoli: FPZ08_20740
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Entry
FPZ08_20740 CDS
T06120
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dea
Devosia ginsengisoli
Pathway
dea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPZ08_20740 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dea03019
]
FPZ08_20740 (recQ)
03400 DNA repair and recombination proteins [BR:
dea03400
]
FPZ08_20740 (recQ)
Enzymes [BR:
dea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FPZ08_20740 (recQ)
Messenger RNA biogenesis [BR:
dea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FPZ08_20740 (recQ)
DNA repair and recombination proteins [BR:
dea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FPZ08_20740 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
QDZ13409
UniProt:
A0A5B8M074
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All DBs
Position
4257117..4258949
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AA seq
610 aa
AA seq
DB search
MDLFGAGPRAIPRDPLAVLRDVFGHKSFRGQQHDVVDHVVGGGDAVVLFPTGSGKSMCYQ
IPAICRPGVGIVISPLIALMRDQVEALKQAGVAAAALNSSLSSEESADVRRKLRNGQLDL
LYVAPERVATPGFANMLSGIDIALFAIDEAHCVSQWGHDFRPEYRELIHLVELFPGVPRV
ALTATADPTTREDIIERLGLEQAQVFTTSFDRPNISYSIVERDKARDQLLAFLAAHKGSS
GIVYCLSRAKVEDTADWLSGKGIPALPYHAGLSAERRSANQDTFLKEENICMVATVAFGM
GIDKPDVRYVAHMDLPASIEAYYQETGRAGRDGQPADAWMSYGMADVVQRRRMIDEGNAP
DEVKRLEHGKLNALLGVCETAECRRKAILGHFGEAHEGNCGNCDTCRSPVETWDGTEAAI
KALAAIYRTGMRFGAAHVIDVLMGKETEKVTRFGHQHQKVFGQGADLDPKVWQSVIRQLT
AMGLIVVDHANHGALTLSEGAHAVFKHERTVTLRKDRPKKSVEVRRQLARAATVPEHALP
LFEALREERTRIAKAQGVPPYVIFHDTTLRAMALARPVHPHDMLNLPGVGQAKLDRYGED
FLAVVKRMVS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggatctgttcggggcggggccgcgggcaatcccgcgcgaccctcttgccgtgttgcgc
gacgtgttcgggcacaagagcttccgcggccagcagcatgatgtggtcgatcatgtggtg
ggtggtggcgacgccgtcgtgctgttccccaccgggtcaggcaagtcgatgtgctatcag
atccccgccatctgccggccgggcgtgggcattgtcatttccccgctcatcgcgctgatg
cgcgaccaggtcgaagcgctgaagcaggccggcgttgccgctgcggcgctcaattcctcg
ctctcttcggaagaatcggcggatgtccgccgcaagctgcgcaatggccagctcgacctg
ctctatgtcgcgcccgaacgggtggcgacgcccggcttcgccaatatgctctcgggcatc
gatatcgcgcttttcgccatcgacgaggcgcattgcgtgagccagtggggccacgatttc
cgccccgaatatcgcgagctgatccatctggtcgagctcttccccggcgtgccgcgcgtc
gcgctgaccgccacggccgacccgaccacgcgcgaagatattatcgagcggctcggcctc
gaacaggcgcaggtcttcaccacaagtttcgaccgccccaacatttcctattccatcgtc
gagcgcgacaaggcccgcgaccagttgctggccttccttgccgcccacaagggcagctcg
ggcatcgtctattgcctctcccgcgccaaggtcgaggacacggccgactggctgtccggc
aagggcattcccgctttgccctatcatgccggcctgtctgcagagcgccgcagcgccaat
caggatactttcctcaaggaggagaacatctgcatggtcgccacggtggccttcggcatg
ggcatcgacaagcccgatgtgcgctatgtcgcccatatggacctgccggcctccatcgag
gcctattatcaggaaaccggtcgcgccggccgcgatggccagcccgccgacgcctggatg
agctatggcatggccgatgtggtgcagcgccgccgcatgatcgacgagggcaatgccccc
gacgaggtcaagcgcctcgaacacggcaaactcaatgccctgctcggcgtctgcgaaacc
gccgaatgccgccgcaaggccattctcggtcatttcggcgaagcccatgaaggcaattgc
ggcaattgcgacacctgtcgctccccggtcgaaacctgggacggcaccgaagccgccatc
aaggctttggccgcgatctatcgcaccggcatgcgcttcggcgccgcccatgtcatcgac
gtgctgatgggcaaggaaaccgaaaaggtcacccgcttcggccaccagcaccagaaagtg
ttcgggcagggcgccgatctcgatcccaaggtctggcagtcggtcatccgccagctcacc
gccatgggcctgatcgtggtcgatcacgccaatcacggcgcattgacgctgagcgaaggc
gcgcatgccgtcttcaagcacgagcgcacggttaccctgcgcaaggaccggcccaagaaa
tcggtcgaggtccggcgccaactggcccgcgccgccaccgtgcccgagcatgctctgccg
ctgttcgaagccctgcgcgaagaacgcacccgcatcgccaaggctcagggtgtgccgccc
tatgtcatcttccacgacaccaccttgcgcgccatggccctggcacgcccggtgcacccc
cacgacatgctcaacctgcccggtgtcggccaggccaagctcgacagatatggcgaggac
ttcttggccgtggtgaaacggatggtctcgtga
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