Pseudodesulfovibrio indicus: AWY79_04825
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Entry
AWY79_04825 CDS
T04404
Name
(GenBank) exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dej
Pseudodesulfovibrio indicus
Pathway
dej03030
DNA replication
dej03430
Mismatch repair
dej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AWY79_04825
03430 Mismatch repair
AWY79_04825
03440 Homologous recombination
AWY79_04825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dej03032
]
AWY79_04825
03400 DNA repair and recombination proteins [BR:
dej03400
]
AWY79_04825
Enzymes [BR:
dej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AWY79_04825
DNA replication proteins [BR:
dej03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AWY79_04825
DNA repair and recombination proteins [BR:
dej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AWY79_04825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AMK12917
UniProt:
A0A126QT72
LinkDB
All DBs
Position
1048609..1049145
Genome browser
AA seq
178 aa
AA seq
DB search
MPDVNDVRFVAIDFETADPKRDSACAVGIVVVEGGEIVARDYRLIRPPRSKFNPFCVQVH
GIHWADVCGEPSFGDLWPELQLWFRDADFIVAHNAAFDKSVLHTCCRESGWDAPVQPFLC
TVQLSKKTWALPSNKLPAVCAHLGIELNHHNAASDAEACALIAVSGLRENPAFLGKVL
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatgtaaatgacgttcggtttgtggccattgatttcgagacggcggaccccaag
cgggattcggcgtgcgcggtgggcattgtggtggtcgagggcggcgagatcgtggcccgc
gactaccgcttgatccgcccgccccggtcgaagttcaacccgttttgcgtgcaggtgcac
ggcatccactgggcggacgtgtgtggcgagccgagtttcggcgacctgtggccggaattg
cagttgtggttccgggacgcggatttcatcgtggcccacaacgcggccttcgacaagtcg
gtgctgcacacctgctgccgcgagtccggctgggacgcgccggtccagccgtttttgtgc
acggtgcagctgtccaagaagacctgggccctgccttccaacaagctgcccgccgtgtgc
gcgcacttgggcatagagctgaaccaccacaacgcggcctcggacgccgaggcgtgcgcc
ctgatcgcggtcagcgggctgcgcgagaatcccgcgttcctgggcaaggtgctgtga
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