KEGG   Pseudodesulfovibrio indicus: AWY79_04825
Entry
AWY79_04825       CDS       T04404                                 
Name
(GenBank) exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
dej  Pseudodesulfovibrio indicus
Pathway
dej03030  DNA replication
dej03430  Mismatch repair
dej03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:dej00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AWY79_04825
   03430 Mismatch repair
    AWY79_04825
   03440 Homologous recombination
    AWY79_04825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dej03032]
    AWY79_04825
   03400 DNA repair and recombination proteins [BR:dej03400]
    AWY79_04825
Enzymes [BR:dej01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AWY79_04825
DNA replication proteins [BR:dej03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AWY79_04825
DNA repair and recombination proteins [BR:dej03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AWY79_04825
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AMK12917
UniProt: A0A126QT72
LinkDB
Position
1048609..1049145
AA seq 178 aa
MPDVNDVRFVAIDFETADPKRDSACAVGIVVVEGGEIVARDYRLIRPPRSKFNPFCVQVH
GIHWADVCGEPSFGDLWPELQLWFRDADFIVAHNAAFDKSVLHTCCRESGWDAPVQPFLC
TVQLSKKTWALPSNKLPAVCAHLGIELNHHNAASDAEACALIAVSGLRENPAFLGKVL
NT seq 537 nt   +upstreamnt  +downstreamnt
atgcctgatgtaaatgacgttcggtttgtggccattgatttcgagacggcggaccccaag
cgggattcggcgtgcgcggtgggcattgtggtggtcgagggcggcgagatcgtggcccgc
gactaccgcttgatccgcccgccccggtcgaagttcaacccgttttgcgtgcaggtgcac
ggcatccactgggcggacgtgtgtggcgagccgagtttcggcgacctgtggccggaattg
cagttgtggttccgggacgcggatttcatcgtggcccacaacgcggccttcgacaagtcg
gtgctgcacacctgctgccgcgagtccggctgggacgcgccggtccagccgtttttgtgc
acggtgcagctgtccaagaagacctgggccctgccttccaacaagctgcccgccgtgtgc
gcgcacttgggcatagagctgaaccaccacaacgcggcctcggacgccgaggcgtgcgcc
ctgatcgcggtcagcgggctgcgcgagaatcccgcgttcctgggcaaggtgctgtga

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