Pseudodesulfovibrio indicus: AWY79_13295
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Entry
AWY79_13295 CDS
T04404
Name
(GenBank) hypothetical protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
dej
Pseudodesulfovibrio indicus
Brite
KEGG Orthology (KO) [BR:
dej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dej03400
]
AWY79_13295
Enzymes [BR:
dej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AWY79_13295
DNA repair and recombination proteins [BR:
dej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AWY79_13295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AMK12012
UniProt:
A0A126QPX7
LinkDB
All DBs
Position
2920371..2923289
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AA seq
972 aa
AA seq
DB search
MIPLTLIPWQNDFMAALADMVAATENPAEMVVLFPHNRPRRHLKGLLATHPDMPRPAFMP
RMTSIADFMADLHRTLAEVVPVRANQLDLIEELHTIVRELRSDRGSLLSRLPDLEREPFL
PWGALLAGLMDDLLRQDLEPQDLAYMEGEVPPYAAALLEQLRAIHGAYVSRLEARGWTTP
GLTARFVLGRLDEVAGALEGKTVLAAGFYALSGAEDRLFRFLWERGTLVPVIHSDPALAD
NDTPHWATAEHSAWMRRWRVRAELPAGVTPEPRAPAIRFCEGYDRHSQLAGLGHDMRGCD
SLDGTAVVLPDEGALLPVLHLLPKVDPKLEPNISMGYPLARTSLARLVETLLELQENRNA
GGAYHRKDMIALIRHPYLRLLGPETKPLRAVFHQWEAIIRHGERFIDPLAHEPDWDDPAL
ADVDPATALPLLREVLDCCLTRFETVGSLTDLGDRLSGLAELLHARGERLWHTYLLDAEC
LFRLTNSVIPQLKGAEISPEPLERPVRHAILRRLLQSERVSFEPDPLSGLQVLGVLETRL
LHFRRLFVLDAVEDRLPGANPPDPLLPDPLRRLLALPDSRERDNVSGYNFYRLLMGADEA
VIYYQSGIQPGEFDPKAVRSRFVEQLLWERERAQGRLLDAKDGVLRFVTFPTSSLPSGPP
SIPVTDRIHDALMERLTKKGLSPSGLDLYMNCPKRFFYQYLSGLRLVETMDEEGDRSEFG
SLVHDVLRDFLAPRIGVGQDLGALDPAPLLASFSERFRASDLHASLPLDARMGLMEAGRY
RLERFVAAQKPATLLGLEQELKAVLTLDGLDIPLRGRIDRVERREEGVIILDYKTGGAVL
PMAKFWSDLLLHERMAEFGPDVADPDLLTDLARAVRSVQLPAYLHLYAEDQKEAPVDAGL
VMLKDDGRENLLLPAKWSEEDREEAVEVLSPLLVRTLVRHMMQASRFDPQPGDRCKWCDF
TKPCGVTPPKDK
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgatccccctgaccctgatcccctggcagaacgatttcatggccgcattggccgacatg
gtcgcggctacggagaaccccgccgaaatggtggtcctgttcccgcacaaccgcccgcgc
cgccacctcaaggggctgctcgcgacccacccggacatgccgcgtcccgcgttcatgccg
cgcatgacctccatcgccgatttcatggccgacctgcaccggaccctcgccgaggtggtg
ccggtcagggccaaccagctcgacctcatcgaagagctgcacaccatcgtccgcgagctg
cgctcggaccggggcagcctgctgtctcggcttcccgacctggagcgcgaacccttcctg
ccgtggggggcgctgctggccgggttgatggacgatctcctgcgccaggacctggagccc
caggacctggcgtacatggagggcgaggtcccgccctacgccgccgcgctccttgagcag
ctgcgcgccatccacggcgcgtacgtctcccgcctggaagccaggggatggaccacgccg
gggctgaccgcccggttcgtgctcggccgcctggacgaggtggccggagctttggaggga
aagaccgtgctggccgccggtttctacgccctgagcggggccgaggaccggttgttcaga
tttctgtgggaacgcgggaccctcgtgccggtcatccattcggacccggccctggccgac
aacgacaccccgcattgggccacggccgagcactccgcctggatgcgccgctggcgggtc
cgggccgagctgcccgcaggcgtgacgcccgaaccgcgcgccccggccatccggttctgc
gagggatacgaccgccattcccaactggcagggctgggccacgacatgcgcggctgcgac
tccctggacgggaccgccgtggtcctgccggacgagggcgcgctcctgcccgtcctgcac
ctgcttcccaaggtggacccgaagttggagccgaatatttccatgggctatcccctggcg
cggacctccctggcccggctggtggagaccctgctcgagcttcaggagaatcggaacgcg
ggcggcgcgtatcaccgcaaggacatgatcgcgctcatccgccatccctacctgcgcctg
ctcggaccggagaccaagccgctgcgcgcggtgttccaccagtgggaggcgatcatccgc
catggagagcggttcatcgatcccctggcccacgagccggactgggacgacccggccctg
gccgacgtggacccggcaacggccctgcccctgctgcgcgaagtcctcgattgctgcctg
acccggttcgagaccgtgggttcactgaccgacctgggcgaccggctgagcggactggcc
gagctgctccacgcccgcggagaacggctctggcacacctatctcctggatgcggagtgc
ctgttccggctgaccaactccgtcatcccccagctcaagggcgcggagatcagccccgag
cccctggaacgcccggtgcgtcacgccatcctgcggcggctgctccagagcgagcgcgtc
tccttcgagccggaccccctgtccgggctccaggtgctcggcgtgctcgaaacccggctc
ctgcatttccggcggctcttcgtgctcgacgcggtggaggacaggctgcccggcgcgaat
ccgcccgacccgctcctgcccgatcccctgcgcaggctcctcgccctgcccgactcccgc
gagcgggacaacgtgtccgggtacaacttctatcggctgctcatgggcgcggacgaggcc
gtgatctactaccagtccggcatccagcccggcgagttcgaccccaaggccgtgcgcagc
cggttcgtggagcagctcctgtgggagcgcgagcgggcgcagggcaggcttctcgacgcg
aaggacggcgtcctccggttcgtgaccttcccgacaagctccctgccctccggtcccccg
tccatcccggtcacggaccgaatccacgacgccctcatggaacggctcacgaaaaaaggg
ctctcgccctcgggcctggacctgtacatgaactgccccaagcggttcttctaccagtat
ctcagcggattgcgcctggtcgaaaccatggacgaggaaggcgaccgcagcgagttcggc
tctctggtccacgatgtgctgcgggacttcctggccccccgcatcggcgtcggccaggac
ctgggcgccctcgacccggcccccctgctcgcctccttcagcgaacggttccgggccagc
gacctccacgcgtccctgcccctggacgcccgcatgggcctcatggaggccgggcggtac
cggctggaacggttcgtggccgcgcaaaagcccgccaccctgctcggactggaacaggag
ctcaaggccgtcctgaccctggacggcctggacatccccctgcgcggacgcatagaccgg
gtggagcggcgggaggaaggcgtcatcatcctggactacaagaccggaggcgcggtcctg
cccatggcgaaattctggagcgatctcctgctccacgagcgcatggccgagttcggcccc
gacgtcgccgatcccgacctgctgaccgacctggcccgtgccgtgcgttcggtccagctc
ccggcctacctgcacctgtatgccgaagatcagaaggaagccccggtggatgcggggctg
gtcatgctcaaggacgacgggcgggagaacctcctgctgcccgccaaatggtccgaagag
gaccgggaggaggcggtggaggtcctgtcgccgctgctggtccggaccctggtccggcac
atgatgcaggcgtcccggttcgacccgcagcccggcgaccgctgcaagtggtgcgatttc
accaaaccgtgcggggtcaccccgcccaaggacaaatag
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