Delftia sp. Cs1-4: DelCs14_0787
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Entry
DelCs14_0787 CDS
T01497
Name
(GenBank) helicase c2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
del
Delftia sp. Cs1-4
Pathway
del03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
del00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DelCs14_0787
09124 Replication and repair
03420 Nucleotide excision repair
DelCs14_0787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
del03021
]
DelCs14_0787
03400 DNA repair and recombination proteins [BR:
del03400
]
DelCs14_0787
Enzymes [BR:
del01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DelCs14_0787
Transcription machinery [BR:
del03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DelCs14_0787
DNA repair and recombination proteins [BR:
del03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DelCs14_0787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
Motif
Other DBs
NCBI-ProteinID:
AEF87823
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All DBs
Position
894376..896721
Genome browser
AA seq
781 aa
AA seq
DB search
MSYTVAVRALCEFTARAGDLDLRFTPAPSALEGMAGHSLVQSRRGKDYETEISLAGEYGD
LRVRGRADGFDAGVGQLEEIKTYRGQIEGVRAHHRALHWAQARIYAHLLCQARGLQRLRV
ALVYFNVGNSEETVLVQEEDAATLRAFFEQQCALFLDWARSEAAHRAAREAALAALRFPM
QGFRAGQRELAVAVYRVARAQQGGQCLMAQAPTGIGKTLGTIFPMLKAMPDQGLDRLFFL
TAKGTGHGLALQALASVNRQIAEQHQPPPQEPAAPQPLPSPPPRLRVLAILARDKACEHL
DKACHGDSCPLARGFFDRLPAARAAALQQAPWDPPAVRAVALAHDICPYYLAQELVRWSD
VVVADYHYFYDSAAMLYALTQAQQWKVGVLVDEAHNLLERARRMYTAELSQFALAAARKS
ATGAVRKALDRLSRSWSALNREQTASYQAHEEVPAGLLGAVQRAVAAIADANADSPMLPG
DPVLDFYWEALQFMALAEQFGGHALFDVHLLPGRSGPRRTPASTLCIRCVVPAPHLAARH
AAAHASVLFSGTLSPPHFYRDILGLPEGTHWLEADSPFQADQLDVQVAGHISTRYRDRDR
SLRPIADLVAAQYARRPGNYLCFFSSFDYLQRVAECLQRTHPDLPVWLQTPSMDEEGRAA
FLARFTEAGQGVGFAVLGGAFSEGVDLPGERLIGAFVATLGLPQVNPVNEEMKRAMDRQF
GADKGYDYSYLYPGLRKVVQAAGRVIRSERDRGVVFLIDDRYRRGEVQALLPRWWRVEGM
R
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
gtgagctacaccgtggccgtgcgcgcgctgtgcgagttcacggcgcgcgcgggcgacctg
gacctgcgcttcacgcccgcgcccagcgcgctggagggcatggccggccacagcctggtg
cagtcgcgcaggggcaaggactacgagaccgagatcagcctggccggtgaatacggcgac
ctgcgcgtgcgcggccgcgccgacggcttcgacgccggagttggccagctcgaggaaata
aagacctaccggggccagatcgagggcgtgcgcgcccatcaccgggcactgcactgggcc
caggcgcgcatctacgcccatctgctgtgccaggcgcgcggcctgcagcggctgcgcgtg
gccctggtgtatttcaacgtgggcaactcggaggaaaccgtgctggtgcaggaggaagac
gcggccacgctgcgcgccttcttcgagcagcagtgcgcgctgttcctggactgggcgcgc
agcgaggccgcccaccgcgcggcgcgcgaggcggcgctggccgcgctgcgctttcccatg
cagggctttcgcgcgggccagcgcgagctggccgtggccgtctaccgcgtggcgcgcgcg
cagcagggcggccagtgcctgatggcgcaggcgcccacgggcattggcaagacgctgggc
accatcttccccatgctcaaggccatgcccgaccagggcctggaccgcctgttcttcctc
acggccaagggcacgggccatggcctggcgctgcaggcgctggccagcgtgaaccggcag
atcgccgagcagcaccagccaccgccgcaggaaccggctgcgccgcagccgctgccctcg
ccaccccccaggctgcgcgtactcgccatcctggcgcgcgacaaggcctgcgagcacctc
gacaaggcctgccacggcgactcctgcccgctggcgcgcggcttcttcgaccgcctgccc
gccgcgcgcgccgccgcgctgcagcaggcgccctgggacccgcctgccgtgcgtgccgtc
gccctggcgcatgacatctgcccctactacctggcccaggaactggtgcgctggagcgac
gtggtcgtggccgactaccactacttctacgacagcgccgccatgctgtacgcgctcacc
caggcccagcaatggaaggtgggcgtgctggtggacgaggcccacaacctgctcgagcgc
gcgcgccgcatgtacacggccgagctgtcgcagttcgcactggccgccgcccgcaagtcg
gccaccggtgccgtgcgcaaggcgctggaccggctcagccgcagctggagcgcgctgaac
agggagcagaccgccagctaccaggcccatgaggaagtgcccgcaggcctgctgggcgcc
gtgcagcgcgccgtggccgccatcgccgacgccaatgccgacagccccatgctgcccggc
gacccggtgctggatttctactgggaggcgctgcagttcatggcgctggccgagcagttc
ggcggccatgcgctgttcgatgtccacctgctgcccgggcgctcaggtccccgtcgcacg
ccggcctccacgctgtgcatacgctgcgtggtgcccgcgccccacctggcggcacgccat
gcggcggcccatgcctcggtgctgttctcgggcacgctgagcccgccgcacttctaccgc
gacatcctgggcctgcccgaaggcacgcactggctggaggccgactcgcccttccaggcc
gaccagctcgatgtgcaggtggccggccacatctccacgcgctaccgggaccgcgaccgt
tcgctgcggcccatcgccgacctcgtggccgcgcagtacgcgcgccggcccggcaactac
ctgtgctttttcagcagcttcgactacctgcagcgcgtggccgaatgcctgcagcgcacc
catcccgatctgccggtctggctgcagaccccgtccatggacgaagagggtcgcgcggcc
ttcctggcccgcttcaccgaagccggtcagggcgtgggctttgccgtgctgggcggggcg
ttctccgagggcgtggacctgcccggcgagcgcctcatcggcgccttcgtggccacgctg
ggcctgccccaggtcaatcccgtgaacgaagagatgaagcgcgccatggaccgccagttc
ggcgcggacaagggctatgactacagctacctctacccggggctgcgcaaggtggtccag
gccgcaggccgcgtcatccgcagcgagcgcgaccgcggcgtggtctttctcatcgacgac
cgctatcggcgcggcgaggtgcaggcgctgctgccgcgctggtggcgggtggagggcatg
cgatga
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