Delftia sp. Cs1-4: DelCs14_1876
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Entry
DelCs14_1876 CDS
T01497
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
del
Delftia sp. Cs1-4
Pathway
del02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
del00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DelCs14_1876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
del03021
]
DelCs14_1876
Transcription machinery [BR:
del03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DelCs14_1876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_40
HTH_24
GerE
MarR
HTH_28
HTH_11
HTH_IclR
HTH_36
HTH_29
TnsD
Motif
Other DBs
NCBI-ProteinID:
AEF88896
LinkDB
All DBs
Position
2109481..2109984
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AA seq
167 aa
AA seq
DB search
MPAAPAALHQEVDTLYRVHHGWLQGWLRRRLGNSTEAADLAQDTFMRLLTRSEPIAAREP
RAFLTTVAQGVVANFMRRRQIEEAYLATLAHLPEPQVPGPETRAILLETLVELDRRLDTL
APTVRRAFLLSQLDGMKQADIAAELQLSLATVQRHIAKAAHCCFFGG
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgccgcccccgccgctttgcaccaagaggtcgatacgctgtaccgcgtccatcat
ggctggctccagggctggctgcggcggcgattgggcaattccacggaggcggccgatctg
gcgcaggacactttcatgcgcctgctcacgcgcagcgagcccattgccgcacgcgagccg
cgtgcctttctgaccacggtggcgcagggcgtggtggccaatttcatgcggcgcaggcag
atcgaagaggcgtacctggccacgctggcgcatttgcccgagccgcaggtgccgggcccc
gagacgcgcgccatcctgctggagacgctggtcgagctggaccgccgcctggacacgctg
gcacccaccgtgcgccgtgccttcctgctgtcgcagctcgacggcatgaagcaggccgac
atcgcggccgagctgcagctgtcgctggccacggtgcagcgccatatcgccaaggccgcg
cactgctgcttcttcggcggttga
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