Desulfobulbus oralis: CAY53_02125
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Entry
CAY53_02125 CDS
T05339
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
deo
Desulfobulbus oralis
Brite
KEGG Orthology (KO) [BR:
deo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
deo03032
]
CAY53_02125
03400 DNA repair and recombination proteins [BR:
deo03400
]
CAY53_02125
Enzymes [BR:
deo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CAY53_02125
DNA replication proteins [BR:
deo03032
]
Prokaryotic type
DNA Topoisomerases
CAY53_02125
DNA repair and recombination proteins [BR:
deo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CAY53_02125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_recom
zf-C4_Topoisom
Toprim_4
Lpp-LpqN
zinc_ribbon_2
Toprim_3
zf-ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AVD70421
UniProt:
A0A2L1GL59
LinkDB
All DBs
Position
complement(520353..522419)
Genome browser
AA seq
688 aa
AA seq
DB search
MKLFIVESPGKVKKIQGFLGPSWKVVASVGHVRDLPERTIGVEPPDFVPRYEATERGAKV
LKDLAYKVKNAEAVYLATDPDREGEAIAWHLADALHLGDARRVTYTEITETAVRAALRQT
RDIDRRLVSAQEARRVLDRLVGYLVSPVLSRQNGCALSAGRVQSPAVRLVVERERAIRDF
RVTAHFGVDLVFEAMEHVSDGWKAAWLPKEGSWLEETQEYVLDRAVAEQVAGIGTVTVQA
CTETECRAAPPAPFTTSTLQQAASAALKINPTRCMALAQKLYESGHITYMRTDSPNLSEE
AIAAIRSWAAEHDHPVPAGPRAWKSKEGAQEAHEAIRPTHFEVEDAGENEEEQALYRLIR
LRALASQLEEAVYAVRVLRLEGEVDGKKAVFEAKGRTLVKPGWKALVARDQTDENEEEPE
NQIPKLSAGTKIKPQEGKVVPRKTRPPARFTEAALVRELEKRGIGRPSTYAAILQNIIQT
HRYLQVDRKRFLVPTEQGEKVVNALGSFGFLDYEFTKRMEEQLDAIAEGREQYQPVVAVT
YNALQSDTGAYIEATSPKCPECGKPLVHHFRKASKEQKGYNFWGCSGHNDGCPVTFADKN
GAPGERQDNRPKVQLSEFICEVCGKPLIHHQGEKNGRAFDFWGCSGWKDGCKATFADDNG
KPGARQDNKPKAAAGGYPGRQGGFRKRL
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgttcatcgtggaatcaccagggaaggtgaaaaagattcagggctttctgggg
ccatcctggaaggtggtggccagcgtgggccatgtgcgggatctgccggaacggacaatc
ggcgttgagcctccggactttgtgccgcgctacgaggccacggagcggggcgcaaaggtg
ctgaaggacctggcgtacaaggtcaaaaatgctgaagctgtgtatctggccactgatccc
gaccgggaaggtgaagccattgcctggcatctggcggatgcgctgcatcttggggacgcc
cggcgcgtgacctatacggaaatcacggaaacggcagtcagggcggcgctgcgccagacc
agggacattgaccggcgtctggtatcggcacaggaggcccgccgggtgctggatcgtctg
gtaggctatctggtctctccggtcctgtcccggcaaaacggctgtgccctgtccgccggc
cgggtgcagtcgcctgcggtgcgcctggtggtggagcgggaacgggcgatccgggacttc
agggttacggcccattttggtgttgacctggtgtttgaggcgatggagcacgtcagcgat
ggctggaaagccgcctggctgccgaaagaaggtagctggctggaagaaactcaggaatac
gtgctggacagggcggttgcggaacaggtggccgggatcgggacggtcacggtgcaggcc
tgcacggaaacggaatgcagggcagcgccgcctgcgccctttacgaccagcaccctgcag
caggccgcctcggcggctctgaaaatcaatccgacccggtgcatggccctggcgcagaag
ctgtatgagagtggccacatcacctatatgcgcaccgacagcccgaacctgtcggaagag
gccatagcggccatccgcagctgggctgcggagcatgatcatcccgtaccggccgggcca
cgtgcctggaaaagcaaggaaggggcgcaggaggcccacgaggccatccggcccacgcat
tttgaagtggaagacgcgggtgaaaacgaagaggaacaggctctgtaccggcttatccgg
ctgcgtgccctggccagccaactggaagaagctgtttatgccgtgcgtgtcctgcgtctg
gaaggcgaggtggacggcaaaaaggcagtcttcgaggccaaaggccgcaccctggtcaaa
ccgggctggaaggccctggtcgccagagaccagacggatgaaaacgaggaggaaccggag
aaccagattccgaaactgtccgccggcacaaaaatcaaaccccaggagggtaaggtagtt
cccagaaagacccgaccaccggcgcgcttcaccgaagccgccctggtcagggaactggag
aaacggggcatcgggcgtccgtccacctatgcggccattctccagaatattatccagaca
cacaggtatttgcaggtggacaggaagcgcttccttgtccccacggagcagggcgagaag
gtggtgaatgccctgggaagttttggtttccttgattacgaattcacaaagcggatggag
gaacaactggatgcgattgccgagggcagggagcaataccaacctgtggtggctgtcacc
tataatgccctgcaaagcgacaccggcgcctacatcgaggcgacttcgcccaaatgtccg
gagtgcggcaagccgcttgtccaccacttcaggaaagcctccaaagagcagaagggttac
aacttctggggctgttccggccacaacgacggctgcccggtaacttttgccgataagaac
ggcgcgcctggagaacggcaggacaacaggcccaaggtgcaattgagcgaattcatatgt
gaggtctgcggcaagccgctcatccaccaccagggcgaaaaaaacggacgcgccttcgac
ttctggggctgctcgggctggaaagacggctgcaaggccacctttgccgatgacaacggc
aagccgggagcacgccaggacaacaagcccaaagcggcagctggcggctacccaggccgg
cagggcggcttccgaaaacgattgtga
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