KEGG   Desulfobulbus oralis: CAY53_02125
Entry
CAY53_02125       CDS       T05339                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
deo  Desulfobulbus oralis
Brite
KEGG Orthology (KO) [BR:deo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:deo03032]
    CAY53_02125
   03400 DNA repair and recombination proteins [BR:deo03400]
    CAY53_02125
Enzymes [BR:deo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     CAY53_02125
DNA replication proteins [BR:deo03032]
 Prokaryotic type
  DNA Topoisomerases
   CAY53_02125
DNA repair and recombination proteins [BR:deo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CAY53_02125
SSDB
Motif
Pfam: Topoisom_bac Toprim Zn_ribbon_recom zf-C4_Topoisom Toprim_4 Lpp-LpqN zinc_ribbon_2 Toprim_3 zf-ribbon_3
Other DBs
NCBI-ProteinID: AVD70421
UniProt: A0A2L1GL59
LinkDB
Position
complement(520353..522419)
AA seq 688 aa
MKLFIVESPGKVKKIQGFLGPSWKVVASVGHVRDLPERTIGVEPPDFVPRYEATERGAKV
LKDLAYKVKNAEAVYLATDPDREGEAIAWHLADALHLGDARRVTYTEITETAVRAALRQT
RDIDRRLVSAQEARRVLDRLVGYLVSPVLSRQNGCALSAGRVQSPAVRLVVERERAIRDF
RVTAHFGVDLVFEAMEHVSDGWKAAWLPKEGSWLEETQEYVLDRAVAEQVAGIGTVTVQA
CTETECRAAPPAPFTTSTLQQAASAALKINPTRCMALAQKLYESGHITYMRTDSPNLSEE
AIAAIRSWAAEHDHPVPAGPRAWKSKEGAQEAHEAIRPTHFEVEDAGENEEEQALYRLIR
LRALASQLEEAVYAVRVLRLEGEVDGKKAVFEAKGRTLVKPGWKALVARDQTDENEEEPE
NQIPKLSAGTKIKPQEGKVVPRKTRPPARFTEAALVRELEKRGIGRPSTYAAILQNIIQT
HRYLQVDRKRFLVPTEQGEKVVNALGSFGFLDYEFTKRMEEQLDAIAEGREQYQPVVAVT
YNALQSDTGAYIEATSPKCPECGKPLVHHFRKASKEQKGYNFWGCSGHNDGCPVTFADKN
GAPGERQDNRPKVQLSEFICEVCGKPLIHHQGEKNGRAFDFWGCSGWKDGCKATFADDNG
KPGARQDNKPKAAAGGYPGRQGGFRKRL
NT seq 2067 nt   +upstreamnt  +downstreamnt
atgaaactgttcatcgtggaatcaccagggaaggtgaaaaagattcagggctttctgggg
ccatcctggaaggtggtggccagcgtgggccatgtgcgggatctgccggaacggacaatc
ggcgttgagcctccggactttgtgccgcgctacgaggccacggagcggggcgcaaaggtg
ctgaaggacctggcgtacaaggtcaaaaatgctgaagctgtgtatctggccactgatccc
gaccgggaaggtgaagccattgcctggcatctggcggatgcgctgcatcttggggacgcc
cggcgcgtgacctatacggaaatcacggaaacggcagtcagggcggcgctgcgccagacc
agggacattgaccggcgtctggtatcggcacaggaggcccgccgggtgctggatcgtctg
gtaggctatctggtctctccggtcctgtcccggcaaaacggctgtgccctgtccgccggc
cgggtgcagtcgcctgcggtgcgcctggtggtggagcgggaacgggcgatccgggacttc
agggttacggcccattttggtgttgacctggtgtttgaggcgatggagcacgtcagcgat
ggctggaaagccgcctggctgccgaaagaaggtagctggctggaagaaactcaggaatac
gtgctggacagggcggttgcggaacaggtggccgggatcgggacggtcacggtgcaggcc
tgcacggaaacggaatgcagggcagcgccgcctgcgccctttacgaccagcaccctgcag
caggccgcctcggcggctctgaaaatcaatccgacccggtgcatggccctggcgcagaag
ctgtatgagagtggccacatcacctatatgcgcaccgacagcccgaacctgtcggaagag
gccatagcggccatccgcagctgggctgcggagcatgatcatcccgtaccggccgggcca
cgtgcctggaaaagcaaggaaggggcgcaggaggcccacgaggccatccggcccacgcat
tttgaagtggaagacgcgggtgaaaacgaagaggaacaggctctgtaccggcttatccgg
ctgcgtgccctggccagccaactggaagaagctgtttatgccgtgcgtgtcctgcgtctg
gaaggcgaggtggacggcaaaaaggcagtcttcgaggccaaaggccgcaccctggtcaaa
ccgggctggaaggccctggtcgccagagaccagacggatgaaaacgaggaggaaccggag
aaccagattccgaaactgtccgccggcacaaaaatcaaaccccaggagggtaaggtagtt
cccagaaagacccgaccaccggcgcgcttcaccgaagccgccctggtcagggaactggag
aaacggggcatcgggcgtccgtccacctatgcggccattctccagaatattatccagaca
cacaggtatttgcaggtggacaggaagcgcttccttgtccccacggagcagggcgagaag
gtggtgaatgccctgggaagttttggtttccttgattacgaattcacaaagcggatggag
gaacaactggatgcgattgccgagggcagggagcaataccaacctgtggtggctgtcacc
tataatgccctgcaaagcgacaccggcgcctacatcgaggcgacttcgcccaaatgtccg
gagtgcggcaagccgcttgtccaccacttcaggaaagcctccaaagagcagaagggttac
aacttctggggctgttccggccacaacgacggctgcccggtaacttttgccgataagaac
ggcgcgcctggagaacggcaggacaacaggcccaaggtgcaattgagcgaattcatatgt
gaggtctgcggcaagccgctcatccaccaccagggcgaaaaaaacggacgcgccttcgac
ttctggggctgctcgggctggaaagacggctgcaaggccacctttgccgatgacaacggc
aagccgggagcacgccaggacaacaagcccaaagcggcagctggcggctacccaggccgg
cagggcggcttccgaaaacgattgtga

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