Drosophila erecta: 6540962
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Entry
6540962 CDS
T01060
Name
(RefSeq) protein SMG5
KO
K11125
protein SMG5
Organism
der
Drosophila erecta
Pathway
der03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
der00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6540962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
der03019
]
6540962
03032 DNA replication proteins [BR:
der03032
]
6540962
Messenger RNA biogenesis [BR:
der03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
6540962
mRNA cycle factors
Common to processing body (P body) and stress granule
6540962
DNA replication proteins [BR:
der03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
6540962
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
PIN_4
DUF4692
Motif
Other DBs
NCBI-GeneID:
6540962
NCBI-ProteinID:
XP_001969559
FlyBase:
FBgn0102484
UniProt:
B3NAB6
LinkDB
All DBs
Position
Unknown
AA seq
1180 aa
AA seq
DB search
MEATLSSGGSSNASSECAIDGGTNRCRGLDPNNGTCTLSQEVKDLYRSLYTASKQLDDAK
KNVQTVGQLFQHEIEEKRSLLVQLCKQIIFKDYQSVGKKVREVMWRRGYYEFIAFVKKSW
HKQGQDAATSQENMQKLERFLCAGIFNYKRLSARMEEIYDLDLKYLIDFSIISDGYISDM
IGDSKDTSHSGTHAVDKSLEAVSFALDTIHSSLLSLGDLHRYFLDFRIDSKLSISKEQVA
KYYLEAFKLNPAIGMAQNQLGTLYYGQNHDLDSTYHYLYSLVCIIPFELSENNLNKLFAK
HTEYLEQMDPEKLDFSIEDFFARFYLIVDIFFFDKEVPDFNALCHCVLIDLRKILCSQQL
RVQEPSIFKIVSILFFCLSKLKMINSPKVYSLHAFLVAACSDLMDACIVTIEQTILARAQ
DNEHFQAEYEQRFQEFDTVVRKSRNEYKNWLAAVGECERKDKKLMPRPHSLKDCSSDSRD
SQHSGEEAKTQEAADGDKIGEAISTRSSDEAKESDLKTPLSCKSKRRGMRLRRRRRKIAQ
SDDSSCYDSESELDTDFYSDEEDYTDLSSNFDTDFSDIDAADPGEPCGEEHYEAANYSKK
ERKSGGGGGGGGLVYSDNEDVVIEEEKIVYPDEVERRSNSQEADSEELLRSFEVLQLNFK
SAEEAQRKPVEGVPVGPPPVSFSEPPKKLVYRNKYTKINPNIIIDCLHNEPTIRALKMLF
DWLRINPEILIGCYHSNPEFVHKIMKLLNYCNIDIFTRKVYFERDLLNTANVRDSLVELF
DVRANVPLTEDFAFKNFDIFQSTQITLDWETIIRERVTPQEESILRIFKMVDFGFFICKQ
KKFNYRFCVKTRRFTETQKKKQREEKKGGGSRRRERRTAPKTNRTKRNEGRTRRYSDRKN
GIVRKSYTSNEEKDTVEECRKVPRKGYLRNRNAEKAAAVIASATGTSVAGGTSASTTTNS
VIEKLNLQSSSGADEERSEAKSKKCELMGKLWLQNEVETLEEELRDSPAHVVMSPFVVVD
SKALTEYNGIVKSLVRTKKCIVLIPNAVLNELDDLKKRSENVRHVIRWLEQEFKQGNRHL
RAQRDNESQPLSLLKISRKMDRDASVFLQIAQFCNHLVANHADPHVSELQKSVVTYLSGD
NLHEKNRQQQNFSYTGILDSIPVRYAQIQSFYAKFKANKK
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgacacttagctcgggcggatcatcaaacgcctccagcgagtgcgccatagac
ggcggtacgaatcgctgtcgcggcttggaccccaacaatggcacctgcaccctcagtcag
gaggtaaaggatctgtataggtccctctacaccgcctccaagcaactggatgatgccaag
aagaatgtgcagacggtgggacagctgttccagcacgaaatcgaagagaaacgctcgctg
ttggtgcagctgtgcaagcaaatcattttcaaggactaccaatcggtgggcaagaaggtg
cgcgaggtgatgtggcggcgtggatactacgaattcattgcttttgtgaagaagagttgg
cacaaacagggccaggatgcggccacgtcccaggagaacatgcagaaactggagcggttt
ctttgcgccggcatcttcaactacaaacgattgtcggcacgcatggaggagatctatgac
ctggatttgaagtatttgattgatttctccatcatcagtgatggctacataagcgacatg
atcggagactccaaagatacgtcgcattcgggcactcacgctgtggacaagagcctggag
gccgtgtcctttgccctcgacaccatacactcatcgctgctcagcctgggcgatctgcat
cggtactttctggactttcgcatcgacagcaaactgagcataagcaaggagcaggtggcc
aagtattatctggaggccttcaagcttaatccagccattggaatggcccaaaaccagttg
ggtacactatactacggacagaatcatgacctagactccacttaccactacttgtattct
cttgtgtgcatcatacctttcgaactgagcgaaaataaccttaacaaactgttcgctaag
cacaccgaatacctggagcagatggatccagaaaaactagacttcagcatcgaggacttc
tttgcccgtttctatctgattgtggacatttttttcttcgacaaggaagtgccggacttt
aacgccctgtgccactgcgttctgattgatctacgcaagatactttgctcccagcagttg
cgcgttcaggagccaagcattttcaagattgtctccattctgttcttctgtctatccaag
ctaaagatgatcaattcaccaaaagtttactcgctgcacgcctttctggtggctgcctgt
tccgatctgatggacgcctgcattgtcaccatcgagcagacaatcctggctcgcgcccaa
gacaacgagcacttccaagcggagtacgagcaacgttttcaagagttcgacactgtggtg
cgcaagtcccggaatgagtacaagaattggctggcggcagtcggcgagtgtgagcgcaag
gacaaaaagctgatgccacgcccgcactctttaaaggattgcagttcggattcgcgagac
agccagcactccggcgaggaggcaaagacccaggaagctgctgacggcgacaagatcggt
gaggctatatccacgcgatccagtgacgaggccaaggagtccgacctgaagaccccgctc
tcctgcaagagcaagcgacgaggaatgcgtctacgccgccgacgccgcaagatcgcccaa
tcggatgacagctcctgctatgacagcgaaagcgaactggacacagacttctacagcgac
gaggaggattacacagatctgagttcaaactttgacaccgatttcagcgacattgatgca
gctgatcctggggagccatgcggcgaggagcattatgaagcagctaattacagcaagaag
gagcgcaaatctggtggcggcggaggaggcggcggcttggtgtactccgacaacgaagac
gttgttattgaggaggagaaaattgtgtaccccgacgaagtagagcgtagatcgaactca
caggaggcggactcagaggagttgctgcgtagctttgaggtactgcaactgaacttcaag
agtgcagaggaggctcaacgcaagccagtggagggcgtgccggtcggaccaccgccggtc
agcttctcagagccacctaagaagttggtttatcgtaacaagtacaccaagattaacccc
aacataattatcgactgtctgcacaatgaaccgacaattcgagccctaaaaatgcttttt
gactggctgcgcatcaacccggagattctcatcggctgctaccactcgaatcccgagttt
gtgcacaagattatgaagcttctcaactactgtaacatcgacatcttcaccaggaaggtt
tacttcgaacgcgacctcctgaacaccgccaacgtgcgcgattcactggtcgagttattc
gatgtgcgggccaacgttcctctcaccgaggactttgcttttaagaactttgacatcttt
cagagcacccagattacactggactgggagaccattatccgggagcgcgtcactccccag
gaagagtccatcctgcgtattttcaaaatggtcgactttggatttttcatttgcaagcag
aagaagtttaactacaggttctgcgtcaagacgcgtcgtttcaccgagacccaaaagaag
aaacagcgcgaggagaagaagggaggcggatcacgtcgccgcgagcgtcgcaccgctccg
aaaactaatcgaacaaagcggaacgaaggacgcacacgtcgctactcagatcgcaagaac
ggcatcgtccgcaagagctacaccagtaacgaggaaaaagacaccgtggaggagtgccgc
aaggtgccgcgcaagggctatctaaggaaccgaaatgctgagaaggcggctgctgttata
gccagtgccactggaacctctgtagccggcggaacttccgcctccacaaccacaaatagt
gtcatcgagaagctgaatttgcagtccagctcgggggccgacgaagagcgctcggaggcc
aagtcgaagaagtgtgagctcatgggcaagctgtggctgcaaaacgaggtggagactttg
gaggaggagctgcgggacagtcccgctcatgtggtgatgtccccatttgtggtggtcgat
tcgaaggcattgaccgaatacaatggcatagtcaagtcgctggtgaggaccaagaagtgc
attgtcctcattccaaatgcagtgctcaatgagttggatgacttgaagaaacgcagcgag
aatgttcgccatgtcatccgttggctggaacaggagtttaagcagggcaataggcacttg
cgtgcccagcgcgataacgaaagtcagccactttccctgctgaagatatcacgcaagatg
gatcgtgacgcctcggttttccttcaaattgcccagttctgcaatcacctggtggccaac
catgccgatccgcacgtcagcgaactgcaaaagagcgtcgtcacgtacttgtccggtgat
aacttgcacgagaagaaccgccagcagcagaacttcagctacaccggcatccttgactcg
atacccgtacgctatgcccagatccagagcttctacgcaaagtttaaggccaacaaaaaa
tga
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integrated database retrieval system