Drosophila erecta: 6541332
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Entry
6541332 CDS
T01060
Name
(RefSeq) probable NOT transcription complex subunit VIP2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
der
Drosophila erecta
Pathway
der03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
der00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
6541332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
der03019
]
6541332
Messenger RNA biogenesis [BR:
der03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
6541332
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
6541332
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
6541332
NCBI-ProteinID:
XP_001968959
FlyBase:
FBgn0117281
UniProt:
B3N5Q9
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MKRHYSKTVDEQQERENSPSPPPPPPYQSPLSSPESLQTPNGYPILYVDVVKNKPKKESL
PSHPPPPPLVPEFSIFREDFPALPGATSAALPSTPSSGIPEDWTAMFSESEHVELVKYRD
AVMLIDRNVSTSGIEVFHQRNHVSEQPRELEFLPQLYGYLSNPSSLNVSLIFNKQFLQEG
VMQRAVNATHQRATQVPNRIHPPPGFENSKLFARLTTNNTGMPLGGVNFELGSPIYERMW
HVQPKAPGAAVEGSFGLLGLAKKLGSIQQNPLLFGNSVSHNVNDAAESIFSGPLPGGSLS
PHEMSYNLPLNFLITAQLNLQEPKTEEMQEELLFLFFYTYTGDMMQMLAAAELAERGWRY
HKFERIWVIRQTDNPNYLFIGFQESGEYNYFNMWQWKILPRHFQLEPGHMERTLSKRELY
ELYGYHPQMSEI
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtcattattccaagacagtggatgagcagcaggagagggagaactctccaagt
ccgccgccaccgccaccctaccaatcgccattatcatcgcccgagtctttgcagaccccg
aacggatatcccatcttgtacgtggatgtggtgaagaataagcccaagaaggagtcgcta
ccgtcccatccaccgccccctccacttgtgccggagttcagcatctttcgcgaggacttt
cccgctctgccaggagccacctctgcggcattaccatccactccgagctctgggataccc
gaggactggaccgccatgtttagcgaaagcgagcacgtcgaattggtcaaatatcgagat
gcggtgatgctcattgatcggaatgtcagcaccagcggcatcgaggtgttccatcagcga
aaccatgtttcggagcaaccgcgggagctggagttcctgccccagttgtacggatatctg
agcaatccgtccagtttaaatgtgagcctaatatttaacaagcaattcctgcaagaaggc
gtcatgcagagggccgtaaatgcgacccaccagagggctacccaagtacctaacagaatc
catccgccacctggcttcgagaattccaaactctttgcacgcctaactaccaacaacact
ggtatgccactgggtggcgtcaacttcgagctgggctcacccatttatgaaaggatgtgg
catgtgcagccgaaagctccaggcgccgctgttgagggatccttcgggttgttgggcctg
gccaagaaactgggatcgatccaacagaatccgcttctattcgggaacagtgtctcgcac
aatgtgaatgatgccgcggagtcgatcttttccggtccacttccaggaggcagtttgagt
ccacacgagatgagctacaatttgccattgaatttcctcattactgcacagttaaaccta
caggagcccaaaaccgaggaaatgcaggaggagcttctttttttatttttctacacatac
actggcgacatgatgcagatgctcgcggcggcggaactggcggaacgtggctggcgctat
cacaagtttgagcgcatctgggtaatacggcagacggacaatcccaactatttgtttatc
ggattccaggagtcaggagagtacaattacttcaacatgtggcagtggaagatcctgcct
cgacactttcaactggagcccgggcacatggagcgcactctatccaagagagagctgtac
gagctgtacggataccatccccagatgtcggaaatatag
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