KEGG   Drosophila erecta: 6550717Help
Entry
6550717           CDS       T01060                                 

Definition
(RefSeq) histone deacetylase 6 isoform X1
  KO
K11407  histone deacetylase 6 [EC:3.5.1.98]
Organism
der  Drosophila erecta
Brite
KEGG Orthology (KO) [BR:der00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:der01009]
    6550717
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:der03019]
    6550717
   04131 Membrane trafficking [BR:der04131]
    6550717
   03036 Chromosome and associated proteins [BR:der03036]
    6550717
Enzymes [BR:der01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     6550717
Protein phosphatases and associated proteins [BR:der01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     6550717
Messenger RNA biogenesis [BR:der03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     6550717
Membrane trafficking [BR:der04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    6550717
Chromosome and associated proteins [BR:der03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     6550717
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: Hist_deacetyl zf-UBP
Motif
Other DBs
NCBI-GeneID: 6550717
NCBI-ProteinID: XP_001978099
UniProt: B3NTM2
LinkDB All DBs
Position
Unknown
AA seq 1130 aa AA seqDB search
MSPPIVTRRSAQQAKIQTRAMASKSKAGTAVAATAAGVISAGSSGGGSGGFNAADPRKTN
KPNAALLEAKRRARNNMLKNQGSGSHECVTDIFQNAVNCKGLVRKPTALIYDESMSHHCC
LWDKEHYECPERFTRVLERCRELNLPERCLELPSRSATKDEILRLHTEEHFERLKETSGI
RDDERMEELSSRYDSIYIHPSTFELSLLASGSTIELVDHLVAGKAQNGMAIIRPPGHHAM
KAEYNGYCFFNNVALAAQHALDVHKLQRILIIDYDVHHGQGTQRFFYNDPRVVYFSIHRF
EHGSFWPHLQESDYHAIGAGAGTGYNFNVPLNALGMTNGDYLAIFQQLLLPVALEFQPEL
IIVSAGYDAALGCPEGEMEVTPACYPHLLNPLLRLADARVAVVLEGGYCLDSLAEGAALT
LRSLLGDPCPPLVEPVPLPRAELAQALLSCIAVHRPHWRCLQLQQTYDCEELQDRDKGQD
LHKVLRQWIGGPPPMDRYPTRDTAIPLPAEQVARNAARLQVLRTETKLSVPSVRVCYAYD
AQMLLHCNLNDTGHPEQPTRIQQIHKMHGEYALLPRMKQLSARAATTDEVCLAHTRAHVN
TVRRLLGREPEDLHGAAAIYNSVYLHPRTFDCATLAAGSVLQAVDSVLRGESRSGICNVR
PPGHHAEQDQPHGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHHGNGTQHIFESNPKVL
YMSLHRYEHGAFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGDLEYALAFQQLVMPIA
YEFNPQLVLVSAGFDAAIGDPLGGCKVTPEGYGMLTHWLSALASGRIIVCLEGGYNVNSI
SYAMTMCTKTLLGDYVPTPQLGAAALQKPATVAYQSCVESLQQCLQVQRNHWRSLEFVGR
RLPSYPVVGENNNEDFLTASLRHLNISSDDAPGAAGGPAGDQPDCGDERPSGSKPKVKVK
TLTDYLAENKEALEQSEMFAVYPLKTCPHLRLLRPEEAPQSLDSGAACSVCGSTGENWVC
LGCRLVACGRYMNAHMEQHSVEAQHPLAMSTADLSVWCYACSAYVDHPRLYAYLNALHVH
KFQEPMAWTHGCAWREDGCYAVGPNGRDEDADQDDAVAGSSICLRLERHN
NT seq 3393 nt NT seq  +upstreamnt  +downstreamnt
atgagcccgcccatagtcacgcgacgtagcgcacagcaggcgaagattcagacgcgggca
atggctagtaaatcgaaggcgggcacggcagtggcggcgacggcggcgggagtgataagc
gctggctcttccggcggcggcagcggcggatttaatgccgccgatccgcgaaagacgaac
aaaccgaacgcagcgctcttagaggcgaaacgtcgagcgcggaacaacatgctcaagaac
cagggctctggatcgcatgagtgcgtcacggatatattccaaaatgctgtcaattgcaag
ggtctggtgcggaaacccacggccctgatctacgatgagtccatgagccaccactgctgc
ctgtgggacaaggagcactacgagtgtcctgagcgcttcacacgcgtcctggaacgctgc
cgcgaactaaatctgccggagcgctgcctggagttgccctcgagatcggccaccaaggat
gagattctgcgcctgcacacggaggagcacttcgagcggctgaaggagacctccgggatt
cgcgacgacgagcgcatggaggagctgagctcccgctacgactcaatttacattcatccg
tccacattcgagctctccttgctggcgagtggctccaccatcgagttggtggaccacctg
gtcgccgggaaggcgcagaatggcatggccataatccggccaccgggtcaccatgctatg
aaggccgagtacaatggctattgcttcttcaacaacgtggctctggccgcccagcacgcc
ctcgatgtgcacaagctgcagcgcatcctgatcatcgactacgacgtgcatcatgggcag
ggaacccagcggttcttctacaacgatcccagagtggtttacttctccatccatcgcttc
gagcacggcagcttctggccgcatctgcaagagtcggactaccatgcgattggagctgga
gcgggcacgggatacaacttcaatgtgccgctgaatgcgttgggaatgaccaatggcgat
tacctagccattttccagcagctgctgctgccggtggctctggagttccagccggagctg
atcatcgtgtcggctggttatgatgcggcgctgggctgtccggaaggcgagatggaggta
acaccggcctgctatccgcatctgctgaatccgctgctgcgactggccgatgcccgggtg
gccgtcgtactggagggcggctattgcctggactcgctggccgagggagcggccctgacc
ctgcgctccctattgggtgatccctgcccgccgctggtggagccagtacctctgccgcgt
gcggaactcgcccaggccctgctcagctgcattgccgtgcaccgaccgcactggcggtgt
ctgcagctccagcagacctacgattgcgaggagttgcaggaccgggataagggacaggat
ctgcacaaggtgctgcgccaatggattggcggaccaccgccgatggatcgttatccaacg
cgcgatacggccattccgttgccagcggaacaggtggccaggaatgcggctcggctgcag
gtgctgcgcacggagaccaagctatcggtgccatcggtgagggtgtgctatgcctacgat
gctcagatgctgctgcactgcaatctgaacgatacggggcatccggagcagccgacgcgc
atccagcaaatccacaagatgcacggcgagtacgctctgctgccgcggatgaagcaactg
tccgccagagcggccaccacggacgaggtgtgtctggcccacacacgtgcccatgtgaat
acagtgcgtcgattgctgggccgcgagccggaggatctgcatggcgctgctgcgatctac
aactcggtgtacctgcatccgcgcaccttcgattgcgccaccctggccgccggatccgtg
ctgcaggcggtggacagtgtgctgcgtggcgaatcccgcagcggcatctgcaacgtccga
ccgccgggccatcatgccgagcaggatcagccgcacgggttctgcatcttcaacaatgtg
gccattgcggcgcagtatgccattcgggatttcggtctggaacgggtactgatcgtggac
tgggacgtccatcacggcaatgggacgcagcacatcttcgagtccaatcccaaggtgctc
tacatgagcttgcatcgctacgagcacggcgccttcttccccaagggacccgatggcaac
ttcgatgtggtgggcaagggagccggcaggggcttcaatgtgaacataccctggaacaag
aagggcatgggtgacctggagtatgcgctggccttccagcagctggtcatgcccattgcg
tacgagttcaatccccagctggtgctggtatccgccggatttgatgctgccatcggcgat
cccttgggcggatgcaaggtgacgcccgagggttacggcatgctcacccactggctgtcc
gccttggccagcggtcggataatcgtctgcctggagggcggatacaacgtgaactccatt
tcgtacgcgatgacgatgtgcaccaagacgctgctgggtgattacgtgccgacgccccag
ctgggagccgctgcgctgcagaagccggccacggtggcctaccagagctgtgtggaatcg
ctgcagcagtgcctgcaggtgcagcgcaaccactggcgctcgctggagtttgtcggacgg
cggctgccgagctatcccgtcgtgggcgagaacaacaacgaggattttcttaccgcctcc
ttgcgacacttgaatatctcaagtgacgatgctccgggagcggcgggcggacccgccggt
gatcagcccgactgcggcgatgagcggccaagcgggagcaagcccaaagtcaaggtaaaa
acgcttaccgattacttggcggagaacaaggaggccctcgagcagagtgagatgttcgcc
gtgtatccgctcaagacgtgtccgcacttgaggctcctgcgcccggaggaggcgccccaa
tcactagacagcggagcggcgtgcagcgtttgcggatcgacgggggagaactgggtgtgc
ctgggctgccgtctggtggcctgtggtcgctatatgaacgcccacatggagcagcactcg
gtggaggcgcagcatccgctggcaatgagcacggccgacctgtccgtgtggtgttacgcg
tgctcggcgtacgtggaccatccccgcctgtatgcctacctgaatgcgctgcacgtgcac
aagttccaggagccgatggcctggacacatggctgtgcgtggcgcgaggatggctgctat
gcggtgggacccaatgggcgagacgaggacgcggatcaggatgatgccgtcgccgggagc
agcatctgcctgcgcctggagcgccacaactga

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