Desulfuromonas soudanensis: DSOUD_2067
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Entry
DSOUD_2067 CDS
T04049
Symbol
recD
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
des
Desulfuromonas soudanensis
Pathway
des03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
des00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DSOUD_2067 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
des03400
]
DSOUD_2067 (recD)
Enzymes [BR:
des01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DSOUD_2067 (recD)
DNA repair and recombination proteins [BR:
des03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DSOUD_2067 (recD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
RecD_N
Helicase_RecD
UvrD-helicase
SH3_13
SLFN-g3_helicase
AAA_22
Herpes_Helicase
AAA_16
UvrD_C
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ALC16834
UniProt:
A0A0M4D1U0
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All DBs
Position
complement(2222898..2224763)
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AA seq
621 aa
AA seq
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MGENTRKTLESSGLFSALSLHFARFLRTLDPGGDDALFLAAALVSEQTSRGDICLNLDAV
AGRPLTVGGEALPGFCAPELPEWTERLRSSTVVGSPGEFTPLVLDRRGRLYLYRYWDYQG
RLAGELLSRGGRKSVVDEVLLGEGLTRLFGAGEKGIVDWQKVAALAAVLGNFAVISGGPG
TGKTSTVVKILALLLEQADGAPLHLALAAPTGKAAARLQESIAAARQMLPVGEGVRRRIP
DQVSTIHRLLGTIRGSSRFRHDRNNPLPCDLVVVDEASMVDLPLMVKLVEAIPKQARLIL
LGDRDQLASVEAGAVLADICAGGGRPRFSPEFVRRAAEIAGLTLPATSGTGGLEDTLVVL
QKSYRFAADSGISALCRAVNAGDGPGALALCDDPAQSDLRFSPLPGASGMGAALAAEVVA
GYGAMLRAATAEDAFAQLGRFMILTPLRRGPWGVAGLNATVEGILQRAGLIREGSRWTPG
QPLMITSNDYRLGLFNGDLGLILPDPDSGGQLRAFFPRGAGVYRKIAPARLPEHQTAYAM
TVHKSQGTEFDRVLLLLPGEEDGNLARELIYTGISRARRSVALWGGRELFAAAVARRTVR
ESGLSEALRGEAAQGEEEEVD
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagaatacccggaagaccctggagagctccgggctcttcagcgctctgagcctg
cacttcgcccgctttctccgcacgctggaccccgggggggacgacgcgctcttcctggct
gcggcactggtcagcgaacagacctcgcgcggggatatctgtttgaatctcgacgcggtc
gccggccggccgctgacggtcggtggggaggcgctccctggtttttgcgccccggagttg
ccggagtggacggaacggctgcgctcctcgacggtggtcgggagccccggggaattcacc
cccctggtcctcgaccgccgcggacggctctacctctaccgctactgggattatcagggc
cgcctggccggggaactcctgtcccggggggggagaaaaagcgtcgtcgacgaggttctc
ctcggcgaagggctcacccgcctcttcggcgccggggaaaaagggatcgtcgactggcag
aaggtagccgccctggccgccgtcctcgggaatttcgccgtcatctccgggggtcccgga
accgggaaaacctccacggtggtcaagattctcgctcttctcctcgaacaggccgacggc
gctcccctgcaccttgccctggcggccccgacaggcaaggcggcggcccggctgcaggag
tcgattgccgcggcgcgtcagatgctccccgtaggagagggggttcggcggaggattccc
gatcaggtgtccactatccaccggctcctcggcacaatccgggggtcatcccggttccgt
catgatcgcaataatccgctcccctgcgatctggtggtggtggatgaggcctcgatggtc
gatctccccctgatggtcaagctggtggaggcgataccgaagcaggcgcgcctgattctc
ctcggcgaccgggaccagctcgcttccgttgaggcgggtgcggttttggccgacatctgc
gccggcggcggacggccgcgtttttctccggagttcgtccgccgggcggccgaaatcgcc
ggtctgactcttcccgccacgtccgggacgggggggctcgaggacaccctcgtcgtcctg
cagaaaagctaccgttttgctgctgacagcggcatcagtgccctgtgccgggcggtcaac
gccggcgacggtcccggggccctggctctttgcgacgacccggcgcaaagtgatctccgg
ttctctccccttcccggagcctccgggatgggggcggccctggccgccgaggtcgtcgcc
gggtacggagcgatgctgcgtgcggcgacggcggaggacgccttcgcccagctcgggcgc
ttcatgattcttacccccttgcgccgcggcccctggggagtcgcgggactcaacgcgacc
gtcgaggggatcctgcaacgcgccgggttgatcagggaggggagccgatggaccccgggg
cagccgctgatgatcacgtccaacgattaccgtctcggactcttcaacggcgatctcgga
ctcattctccccgaccccgactccggcggccagctcagggccttttttcctcgcggcgcc
ggtgtttacaggaaaattgccccggcgcgcctgccggagcatcagacggcctacgccatg
acggtgcacaagagtcaggggacggaattcgaccgggttctccttttgctgccgggggaa
gaggacgggaatctggcaagggagctgatctatacggggatcagccgggcgcgccgctca
gtggccctctggggcgggcgggaactcttcgccgcggcggtggcgcgacgaaccgtgcgg
gaatccgggctttccgaagcccttcggggagaggcggcgcagggagaagaggaagaggtt
gattga
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