Dehalococcoides mccartyi 195: DET0441
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Entry
DET0441 CDS
T00223
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
det
Dehalococcoides mccartyi 195
Pathway
det03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
det00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DET0441 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
det03400
]
DET0441 (uvrB)
DNA repair and recombination proteins [BR:
det03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DET0441 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DET0441 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
Kinesin
Microtub_bd
P-loop_SecA
ATPase
SPOUT_MTase_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AAW40254
UniProt:
Q3Z9B4
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All DBs
Position
complement(418392..420398)
Genome browser
AA seq
668 aa
AA seq
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MPDFKIVSDFALTGDQPQAVEKLSEGLAHGLTDQTLLGVTGSGKTFTMANVIARVNRPTL
IISHNKTLAAQLYSEMKEFLPENSVEYFVSYYDYYQPEAYVPQKDMYIEKDADINEEIDK
LRHAATRALFERRDVVIVASVSCIYGLGEPEEYRSFVLPLKKGQSLRRDLILRRLVDMQY
ERNDIDFSRGKFRLRGDTLEIQPAYEELALRVEFFGDEIERIVSLDPVSGELLADIDEIN
IYPAKHFVTSAEKMAEAIKGIQAELEDRLKELEAEGKMLEAARLKQRTNYDLEMMQQAGY
CSGVENYSRHLAGRKAGSAPWTLLDYFPEDFLLIVDESHMSLPQIRGMYAGDAARKKTLV
DYGFRLPSAMDNRPLSFDEFKARVKQAIYVSATPGPYEKEHSQQVVEQLVRPTGLLEPVI
TVKPTGGQIDDLLEEVKKRVDKKERVLITTLTKKMSEKLADYLVEMGIKTHYLHSEVDTL
ERVEILRDLRLGVYDVIVGINLLREGLDLPEVSLVAILDADKEGYLRSEQALIQTMGRAA
RHVDGQVIMYADKITGSMQRAMDEISRRRKIQEDYNRLHNITPQGIRKAIKDINERIRSV
TAEVSGPEFRPAPTLREDIVRLIKELESQMKKAAKNLEFERAALIRDRVVELRAALETDP
VNKNERTK
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatttcaaaatagtctcggattttgcacttaccggtgaccagccccaggcggtg
gaaaaactctctgaggggctggcacatggccttacagaccagaccctgctgggggttacc
ggctccggtaaaacatttaccatggcaaatgtaattgccagagtaaaccgccccaccctg
ataatcagccacaataaaactctggctgcccagctttactccgaaatgaaagaattcctg
cccgaaaattcggtggaatactttgtaagttattatgattattaccagcctgaagcttat
gtcccccaaaaggacatgtatattgaaaaagacgctgacataaacgaggaaattgataaa
ctccgccatgcggccacccgcgccctgtttgaacggcgggatgtggttatagtagcctcg
gtttcctgcatttacggtttgggtgaacccgaagaataccgcagttttgtactccctttg
aaaaagggccagtccctgaggcgtgaccttatactgcggcggctggtggatatgcagtat
gagcggaatgacatagatttctcccgcggcaagttccgcctgcggggagacacccttgaa
atccagcctgcctacgaagaactggctctcagagtggagtttttcggtgatgagatagaa
cggatagtcagccttgacccggtaagcggcgaactgctggctgacatagatgagataaat
atctaccccgccaagcattttgtaacctcagccgaaaaaatggccgaagctataaagggc
attcaggccgagcttgaagaccgcctgaaggaactggaagccgagggcaaaatgctggag
gccgcccgcctgaagcagcgcaccaattatgaccttgaaatgatgcagcaggcggggtat
tgctccggggtggaaaactattcccgccacctggcaggacggaaagcaggcagcgccccc
tggacactgctggattactttccggaagatttcctgctgatagtagatgaatcccatatg
agcctgccccaaatacggggtatgtatgccggagatgccgcccgcaagaaaaccctggtg
gactacggcttccgcctgccctcagccatggataaccgccccttaagctttgatgaattt
aaagccagagtcaaacaggctatttacgtatcagccacacccggcccatatgaaaaagaa
cactcccagcaggtagttgagcaactggtacgccccaccgggctgcttgaaccggttata
accgtaaaacccaccggcggccagatagatgacctgctggaagaagtaaagaaacgggta
gataaaaaagaacgggtgcttatcactacccttaccaaaaagatgtctgaaaaactggca
gattatctggtggaaatgggaataaaaacccattatctgcattcggaagtagacacgctg
gaacgggtggaaatcctgcgtgatttgcggctgggggtttatgacgttatagtaggtata
aacctgctccgcgaagggcttgacctgcctgaagtcagcctggtggccatactggatgcc
gacaaagagggttatctgcggagcgaacaggcccttatccaaactatggggcgggctgcc
cgccatgtggacgggcaggttatcatgtatgcagataaaatcaccgggtctatgcagcgg
gctatggacgaaatcagccgccgccgcaaaatacaggaagactataaccgcctgcacaat
attaccccgcagggtatccgcaaggctatcaaggatataaatgaacgtatccgctcagtc
accgccgaagtcagcggccctgaattcaggcctgcccccactctcagggaagacattgtc
cgtttgataaaagaactggaaagccagatgaaaaaagcggccaaaaatctggaatttgaa
cgggctgcccttatccgtgaccgggtggtagaactgcgggcggcacttgaaacagacccc
gtaaataaaaatgaaagaaccaagtaa
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