Cavenderia fasciculata (cellular slime mold): DFA_00786
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Entry
DFA_00786 CDS
T02668
Symbol
rbm8A
Name
(RefSeq) RNA recognition motif-containing protein RRM
KO
K12876
RNA-binding protein 8A
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03013
Nucleocytoplasmic transport
dfa03015
mRNA surveillance pathway
dfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DFA_00786 (rbm8A)
09122 Translation
03013 Nucleocytoplasmic transport
DFA_00786 (rbm8A)
03015 mRNA surveillance pathway
DFA_00786 (rbm8A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_00786 (rbm8A)
03041 Spliceosome [BR:
dfa03041
]
DFA_00786 (rbm8A)
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
DFA_00786 (rbm8A)
Spliceosome [BR:
dfa03041
]
Complex C
Other components
EJC/TREX
DFA_00786 (rbm8A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
14873826
NCBI-ProteinID:
XP_004358769
UniProt:
F4PTU0
LinkDB
All DBs
Position
Unknown
AA seq
211 aa
AA seq
DB search
MEVDKEDKPVDRVIGEDGKERLYTEDIRKGVLPSRQKGRGHDDSEERDTDSRYAGSDGVF
QVLDKQEVDITPGEPIKSIEGWIVIIDNIHEEAQESDLRDLFAEYGPIRNIHLNYDRRTG
FSKGYALIEYEKHQEAEEAVKQSGKIQLAGKDLTVNWTFVGGKPTSATGVIHFRTNRSIN
RERGGDQNGGRSRRRESGGGNNNRRRSDNRG
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggaagttgataaagaagataaaccagttgatagagtcattggtgaagatggaaaggaa
agattatatacagaggatattagaaagggtgtattgccatcacgacaaaaaggtcgtggt
catgacgactcggaggaaagagataccgatagtagatatgcaggttcagatggtgtgttt
caagtattggataaacaagaagtagatatcacaccgggtgaaccaatcaaatcaatagaa
ggatggatcgtcatcattgacaacatacacgaagaggctcaagaaagcgatttgcgcgat
ctctttgcagaatatggacccatcagaaatatacacctaaactatgacagacgtactggt
tttagtaaaggttatgctttgattgaatacgagaaacatcaagaggctgaagaagccgtc
aaacaaagtggaaaaatacaactagctggcaaagatctcactgtcaattggacatttgtt
ggcggcaaacctacaagtgctactggtgtcattcattttagaacaaatagatcaataaat
agagaaagaggtggtgatcaaaatggtggaagatcaagaagaagagaatctggtggtgga
aataataatagaaggagaagtgataatagaggttaa
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