Cavenderia fasciculata (cellular slime mold): DFA_05965
Help
Entry
DFA_05965 CDS
T02668
Symbol
pus7
Name
(RefSeq) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfa03016
]
DFA_05965 (pus7)
Enzymes [BR:
dfa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
DFA_05965 (pus7)
Transfer RNA biogenesis [BR:
dfa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DFA_05965 (pus7)
Prokaryotic type
DFA_05965 (pus7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-GeneID:
14876197
NCBI-ProteinID:
XP_004361680
UniProt:
F4PJQ5
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MSESIEPSTSTTTTTTTTSSTTTPTPPAAKNTGFSRNEATVGITCFLGTTAPYKGLLKQR
YSDFIVNEVDLDDNVVSLTSLTYEDPTTPKQDATATVETETTTTTESESESSKPINTEEE
IIKFNKLKELVGEEQMEEFKAFFNGPSKTEITSTYKFKENKSKEERTNLHKLIKDFDLVT
ETKDNRVVVSAGCNTRKRELARNVWGGDKPKFVQFVLHKENKELLDAIGILSNVMHVNQR
SFSFAGTKDKRGVTSQRVTVYRQSPENIVAANQRLFSSIRVGGDFKYVDKHLMLGDLNGN
RFTVVIRDVSGDDELIAESVAQLNHTGFINYYGLQRFGTGSVSTNQVGLEVIKGNWENAV
MLILGPREGENEDFIKARTKYKENGDADALLQALPKYMVSERKLLMVLKRDKKGFYNAIN
SLPRTLRMLYPHSYQSYIWNKMASERITKFGFKEVVVGDLVAVSKNNNNKQQQQEKQKDE
KNEEEGSGDVVEMPVEDDGGDDKDDYQVTHVTEDDIKNKRYTIDQVVLPMPGSNIVYPSN
EIGQRYKEVMLEDGVDEAKINHNKTKVFHLKGSYRKIISRPINLEYKIYRYDSAKIPLAL
SDLDRLNGKEEPQDLPDGKYKALRLSFSLPSSSYATMVYRELLKQPTNVLQQQQQFNHEK
DNNNNNEEDNNTKNLKRKLSEFANNDGDTTKKEQNNEKEETTITEERDTKRSSSIPL
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaatcaatagaaccatcaacctctactactacaaccacaactaccacctcttct
actactacaccaactccaccagcagccaagaacactggattctctagaaatgaagcaact
gttggtataacatgctttctcggcactactgcaccatacaaaggcttattaaaacagaga
tacagtgattttatagtaaatgaggtcgatttggatgataatgttgtcagtttaacttca
ttgacttatgaagatccaactacaccaaagcaagatgccactgctacagttgaaactgaa
actacaactacaacagaatcagaatcagaatcatctaaacctataaatactgaagaagaa
attattaaatttaataaattaaaagaattggtaggagaagaacaaatggaagaatttaaa
gccttttttaatggaccatcaaagacagagataacatcaacctataaattcaaagagaac
aaaagtaaagaagaacgtaccaatctacacaaattgatcaaagattttgatttggtcact
gaaactaaagataatcgtgttgttgttagtgctggatgtaatactagaaaaagagaatta
gcaagaaatgtatggggaggtgataaaccaaagtttgttcaatttgtgttacacaaggag
aataaggaattattggatgccattggcattctatcaaatgtgatgcatgtcaatcaaaga
tcgttttcatttgctggtaccaaggacaagagaggtgtgacttctcaacgagtcacagtc
tacagacaatcacccgagaatatagtggctgccaaccaacgtttgttttcatcgattcgt
gttggaggtgatttcaagtatgtcgacaaacacttgatgttgggtgatttaaatggtaac
cgtttcactgtggtcattagagacgtgtcgggagacgacgagttgattgccgagtcggtc
gcacaactcaaccacactggattcatcaactattatggtttacagagatttggaactggg
tcggtatcaaccaaccaagtcggcttggaagtgatcaagggtaattgggagaatgcagtc
atgttgatcttgggaccaagagaaggcgagaatgaagactttataaaggcacgtacaaag
tacaaagaaaatggtgatgcagacgcactcttgcaagctctacccaagtacatggtcagc
gagcgcaaactactgatggttttgaaaagagataaaaagggattctacaatgcaatcaac
agtcttccacgcacacttcgtatgctctatccacattcttaccaaagttatatttggaac
aaaatggcatctgaaagaatcacaaagtttggtttcaaagaggttgtagttggtgatttg
gttgctgtctctaaaaataataataacaaacaacaacaacaagagaaacaaaaggatgaa
aagaatgaagaagaaggtagtggggatgttgttgaaatgcctgtggaagatgatggaggt
gacgacaaggatgattatcaagtgacacatgttaccgaagatgacattaagaacaaacga
tacactatcgatcaggttgtactacccatgcctggatcaaacattgtttatccaagcaat
gaaattggacaacgttacaaagaggttatgctcgaggacggagttgatgaggctaaaatc
aaccacaacaagaccaaagtattccacctcaaaggcagttatagaaagattatttctcgt
ccaatcaaccttgaatacaagatctatagatacgacagtgcaaagatcccattggcactc
agcgatttggatcgtctcaatggaaaggaggaaccacaagacctaccagacggtaaatac
aaagcactcagattatcattctcccttccatcttcatcctatgctacaatggtttacaga
gaattacttaaacaaccaacaaatgttttacaacaacaacaacaatttaatcatgaaaaa
gacaataataataataatgaagaagacaataataccaaaaatcttaaaagaaaattgtct
gaatttgcaaataatgatggtgatacaacaaaaaaggaacaaaacaatgaaaaagaagag
acaacaataaccgaagaaagagacaccaaaagatcatcgtcgataccactctga
DBGET
integrated database retrieval system