Dyadobacter fermentans: Dfer_5135
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Entry
Dfer_5135 CDS
T00970
Name
(GenBank) outer membrane efflux protein
KO
K12340
outer membrane protein
Organism
dfe
Dyadobacter fermentans
Pathway
dfe01501
beta-Lactam resistance
dfe01503
Cationic antimicrobial peptide (CAMP) resistance
dfe02020
Two-component system
dfe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dfe00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Dfer_5135
09132 Signal transduction
02020 Two-component system
Dfer_5135
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Dfer_5135
01503 Cationic antimicrobial peptide (CAMP) resistance
Dfer_5135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dfe02000
]
Dfer_5135
02044 Secretion system [BR:
dfe02044
]
Dfer_5135
01504 Antimicrobial resistance genes [BR:
dfe01504
]
Dfer_5135
Transporters [BR:
dfe02000
]
Other transporters
Pores ion channels [TC:
1
]
Dfer_5135
Secretion system [BR:
dfe02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Dfer_5135
RTX toxin transporter
Dfer_5135
Multiple protein transporter
Dfer_5135
RaxAB-RaxC type I secretion system protein
Dfer_5135
Antimicrobial resistance genes [BR:
dfe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Dfer_5135
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Dfer_5135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
STN
Flu_PB2_6th
PanZ
Motif
Other DBs
NCBI-ProteinID:
ACT96335
UniProt:
C6VSA0
LinkDB
All DBs
Position
complement(6201116..6202462)
Genome browser
AA seq
448 aa
AA seq
DB search
MGSLTVLKKYKHTFFLLLLCSGPAMAGIPGAGSPADTLALTLDEAVATALKNSYEIEIAK
NNVEANTILNNYGVAGGLPTVALNATNTEQITQVYQKLNNGTEISRNAAAGNNTQVNLAA
GMLLYNGRRVVATKKRLAELQYQSAEVLNSQIQNTIALVMTSYYDVVRQLSYINTIRTSI
VASEKRLEILRVRKEAGMANNADIFQAEIDLNTLNQTLLNQQMVAQVAKTELLRTLTLDP
KSAVTIKDTITVDNNMQLASVLDRLAANADIQAADHQIRINELIVRETAALRYPTVRFNA
AYNFSRNQTAAGFTLLNRVVGPQAGITLAVPIYNGSAFKRQRQAAEIDTKNAHLQKNTLM
RDYSANAVKMYQTYQSSIEQLETQKKNYSLSKQLLDLTLQRFELIQATIIDVREAQRSFE
EAGYRLINLNYAAKAAEIELKRISNTLQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgctcaccgttttaaaaaaatacaaacatacattcttccttctcctgctctgc
tccgggcctgcaatggccggcatccccggagcgggctcgcccgcagacaccctcgcgctc
acgctagacgaggcggttgccacggctttgaaaaacagctacgaaattgaaattgccaag
aacaacgtagaggcaaacaccatcctgaacaactacggcgtggcgggcggcttaccgacg
gtggccttgaacgctaccaataccgagcagatcacccaggtgtaccagaaactgaacaac
ggcacggagatcagccgtaacgcggcagcgggtaataacacgcaggtgaacctcgcggca
ggaatgctgctgtacaacggaaggcgtgtggtagctacaaaaaaacggctggccgaactg
caatatcaaagtgcggaagtccttaattcgcaaatccagaacacgatcgcgctcgtgatg
acgagctattacgatgtcgtgcggcagctgagctacatcaataccatccgcacctccatt
gtcgcgtccgaaaagcggctcgaaatcctgcgcgtacgcaaggaagccggaatggccaat
aatgcggatattttccaggcggaaatcgacctgaacacgctgaaccagacattgctcaac
cagcaaatggtagcgcaggtggcgaaaacggaattgctccgcacgctcacgcttgatccc
aagtcggcggtgacgatcaaggacacgatcacggtggataacaatatgcagctggcgtcc
gtcctcgatcgccttgccgccaatgccgatattcaggcagcagaccatcagatcaggatt
aatgaactgattgtgagagaaacggctgcattgcgctatcctacggtccgtttcaatgca
gcatacaacttctcccgcaaccagacggccgcaggtttcaccttgctcaaccgcgtggtc
ggcccgcaggcggggataacgctggctgttccgatttacaacggatcagcgtttaagcgg
caacggcaggcggccgaaatcgatacgaaaaatgcgcatttgcagaaaaatacattgatg
cgcgattacagcgctaatgccgtcaaaatgtaccaaacctaccagagttcgatcgaacag
ctcgaaacccagaagaaaaactactcgctcagcaagcagctgctcgaccttacgctgcaa
cgcttcgaactgatccaggcgacgattatcgacgtgcgtgaggcgcaacgcagcttcgaa
gaggccggatatcgcctcatcaacctcaactatgcagccaaagcagccgaaattgagcta
aaaagaatcagcaacacgcttcaataa
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