Desulfovibrio fairfieldensis: AXF13_11375
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Entry
AXF13_11375 CDS
T04293
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
dfi
Desulfovibrio fairfieldensis
Pathway
dfi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dfi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AXF13_11375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfi03021
]
AXF13_11375
03400 DNA repair and recombination proteins [BR:
dfi03400
]
AXF13_11375
Enzymes [BR:
dfi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AXF13_11375
Transcription machinery [BR:
dfi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AXF13_11375
DNA repair and recombination proteins [BR:
dfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AXF13_11375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
AMD90673
UniProt:
A0A0X8JLP4
LinkDB
All DBs
Position
2686650..2686889
Genome browser
AA seq
79 aa
AA seq
DB search
MARITVEDCQERVDNRFLLVQMAIKRVHQYREGYEPLLETRNKEVVTALREIAAGKVMPD
DKSLYNPLSDGQGVPNTEG
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtattactgtggaagattgtcaggaacgtgtggacaaccgtttcttgctggtg
cagatggccatcaaacgcgtacaccagtaccgcgaagggtatgaacccctgctggaaacg
cgcaacaaggaagtggttaccgccctgcgtgaaattgccgccggcaaggtcatgccggac
gacaaaagtctgtacaaccccctgtccgacggacagggcgtgcccaataccgagggctag
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