Dickeya fangzhongdai DSM 101947: CVE23_01060
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Entry
CVE23_01060 CDS
T05277
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00071
Fatty acid degradation
dfn00280
Valine, leucine and isoleucine degradation
dfn00310
Lysine degradation
dfn00362
Benzoate degradation
dfn00380
Tryptophan metabolism
dfn00410
beta-Alanine metabolism
dfn00640
Propanoate metabolism
dfn00650
Butanoate metabolism
dfn00907
Pinene, camphor and geraniol degradation
dfn00930
Caprolactam degradation
dfn01100
Metabolic pathways
dfn01110
Biosynthesis of secondary metabolites
dfn01120
Microbial metabolism in diverse environments
dfn01200
Carbon metabolism
dfn01212
Fatty acid metabolism
Module
dfn_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CVE23_01060
00650 Butanoate metabolism
CVE23_01060
09103 Lipid metabolism
00071 Fatty acid degradation
CVE23_01060
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CVE23_01060
00310 Lysine degradation
CVE23_01060
00380 Tryptophan metabolism
CVE23_01060
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CVE23_01060
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CVE23_01060
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CVE23_01060
00930 Caprolactam degradation
CVE23_01060
Enzymes [BR:
dfn01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CVE23_01060
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CVE23_01060
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CVE23_01060
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
CVE23_01060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Pyr_redox_2
F420_oxidored
UDPG_MGDP_dh_N
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
ATZ92694
UniProt:
A0A2K8QGU7
LinkDB
All DBs
Position
complement(231173..233362)
Genome browser
AA seq
729 aa
AA seq
DB search
MIYQGDTLYLNWLEDGIAELVFAAPGSVNKLDTRTVASLGDALNHLKRQPSLRALLLRSD
KNAFIAGADITEFLSLFAAPPETLHQWLTEANAIFSQLEDLPVPTLSAINGYALGGGCEC
ALATDFRIATPDVRIGLPEVKLGIMPGFGGTVRLPRLLGADGALEIITAGKDLPAGEALK
VGLVDAVADSDKLLPAAVHMLRLAMTDRLDWRDRRRQKQSPLRLNRIEATMSFATANALV
QQAAGRHYPAPMMALKTIEAAAGLHRDAALKIETDNFVELTQTTAAHDLVGVFLNEQAVK
SAAKKWAADATPPARVAVLGAGIMGGGIACQSARKGVPVWMKDISEKALTLGMEEAAKLL
NAQLERGKMDAMTMAGVLARIHPTLNNNGLEQADLIIEAVVENPQVKARVLADVEACVSE
QTLIVSNTSTIPIGQLAASLQRPQHFCGMHFFNPVHRMPLVEVIRGPQTDEKTLARVVAY
ASKIGKTPIVVNDCPGFFVNRVLFPYIAAFNLLMRDGADFRDVDAVMEKQFGWPMGPAYL
LDVVGLDTAHHAQAVMSAGFPQRMAKTYRDAVDVLVEHQRFGQKSGAGFYRYYPDAKGKP
RREQDEQTDILLDAVCEPKRTFSAQEIIHRLMVPMLNEVARCLEEGIVATPAEADMALLY
GLGFPPFHGGACRYLDTLGSQRYVEIAQSLASLGPLYAIPDSLLQMAQRQQRYYPAVEPH
ADLSLHQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcaaggcgacacgctgtacctcaactggctggaagacggcattgccgaactg
gtttttgccgcgcccggcagcgtcaacaaactggatacccgcaccgttgccagccttggc
gacgcgctaaatcacctgaaacgccaaccgtcgctacgcgccctgctgctgcgctcggat
aaaaacgcgttcattgccggagcggacatcaccgaattcctgtcgctgtttgccgccccg
ccggaaacgctgcatcagtggctgaccgaagccaacgccattttcagccagttggaggat
ttgccggtcccgacgctatccgccatcaatggctatgcgctgggcgggggatgcgaatgc
gcgctggcgaccgatttccgcatcgcgacgcctgacgttcgcatcgggttgccggaagtc
aaactggggatcatgcccggatttggcggtacagtccgcttgccacggttgctgggcgcg
gacggcgcgctggagatcatcaccgccggtaaagatttgcctgccggcgaggccctgaaa
gtcgggctggttgatgcggttgcggacagcgacaaactgctgcccgccgccgtgcatatg
ctgcgtctggcgatgacggaccggctcgactggcgtgaccgccgccgtcagaaacaatcg
ccgctacggcttaaccgtatcgaagccaccatgagtttcgctaccgccaacgcgttggtg
caacaggcggcgggccgccactaccccgcgccgatgatggcgctcaaaaccatcgaagcc
gccgccggactccaccgcgacgccgcgctgaagatagaaaccgataatttcgtcgagcta
acccaaacgacggcggcgcacgatctggtcggcgtcttccttaacgagcaggccgtaaaa
agcgccgccaaaaaatgggccgccgacgccacgccgccggctcgtgttgccgtgctcggc
gccgggatcatgggcggcggcatcgcctgccagtcggcacgcaaaggggtgccggtatgg
atgaaagacatcagtgaaaaagcgctgacgctggggatggaagaagccgccaaattgctc
aacgcacagctggaacgcggcaaaatggacgccatgaccatggcgggggtgctggcccgc
atccacccgacgttgaacaacaacgggcttgaacaggcggacctgatcatcgaagcggtg
gtggaaaacccgcaggtaaaagccagggtgctggctgatgtggaagcctgcgtcagcgag
caaacgctgatcgtctccaatacctcgacgattcccatcggacagttagcagcctcgttg
cagcggccgcaacacttctgcggtatgcactttttcaatccggtgcatcgtatgccgctg
gttgaagtgattcgcggtccacaaaccgatgagaaaacgctggcccgcgtggtggcctac
gccagcaagatcggcaaaaccccgatcgtggtgaacgactgcccgggatttttcgtcaac
cgcgtgctgtttccctacatcgccgccttcaacctgttgatgcgcgacggcgcggatttc
cgcgacgtggacgccgtgatggaaaaacagttcggctggccgatggggccggcttatctg
ctggatgtggtcggattagataccgctcaccacgctcaggcggtcatgtcggcgggcttt
ccgcagcgcatggcgaaaacctatcgcgacgcagtcgatgtactggtggaacatcagcgt
ttcggccagaagagcggcgcgggcttctaccgttactacccggacgctaaaggcaaaccg
cgccgggaacaggacgagcagaccgatatcttgctggatgcggtctgcgagccgaagcgc
accttcagcgcgcaggagattatccatcgcctgatggtgccgatgctcaacgaagtcgcg
cgttgtctggaagaaggcatcgtcgccaccccggcggaagccgacatggcgctgctttac
ggtctaggcttcccgccgttccacggcggcgcttgccgttatctggatacgctgggcagc
caacgctatgtggaaatcgcccagtcgctggcatcgctgggaccgctttacgccataccg
gacagcctgttgcagatggcgcagcgccagcagcgttattacccggcggttgaacctcac
gccgatctttctcttcaccaaccggcataa
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