KEGG   Dehalogenimonas formicexedens: Dform_01068Help
Entry
Dform_01068       CDS       T04654                                 

Gene name
ddl
Definition
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
dfo  Dehalogenimonas formicexedens
Pathway
dfo00550  Peptidoglycan biosynthesis
dfo01100  Metabolic pathways
dfo01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:dfo00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    Dform_01068 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Dform_01068 (ddl)
 09160 Human Diseases
  09168 Drug resistance
   01502 Vancomycin resistance
    Dform_01068 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:dfo01011]
    Dform_01068 (ddl)
Enzymes [BR:dfo01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Dform_01068 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:dfo01011]
 Precursor biosynthesis
  Amino acid ligase
   Dform_01068 (ddl)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C GARS_A ATP-grasp_3 ATP-grasp_4 ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID: APV44403
UniProt: A0A1P8F7J3
LinkDB All DBs
Position
1005489..1006490
Genome map
AA seq 333 aa AA seqDB search
MKIGLAYDLKQSITATPAAPVDALEEYDSAETVNLLAAAIEQAGHQPVKLGGGREFLDNV
LGNPVDFVFNISEGRGAYRSREAQVPSVLEMLGIPYSGADPQTLAIALDKPLTKQIVQLA
GVKTPQWRFFAKPEEARHADWDDFRFPAFVKPAFEGSSKGIRLTSTAGSPAEVIDHVEKL
FEGYGQAVIAEEFIDGDEVTCGVIGNISPGKPQPLVLPMRIVPRQKNGPFIYSLEVKRDY
KKLVDYEFPAQLPPAVIDRIKSQALTVFGTLGCRDFTRMDFRIAADGTPHFLEVNPLPGL
SLDSDLFIIATGMGWSHARLIVTILENAISRYP
NT seq 1002 nt NT seq  +upstreamnt  +downstreamnt
atgaaaatagggctggcgtacgaccttaaacaatccatcaccgctacgcccgctgcccca
gttgatgctttagaagaatacgattcagccgaaacggtgaatcttctcgccgccgccatc
gagcaagccggccaccagccggtcaaactcggcggcggtcgcgaatttttagacaacgtt
ttgggcaacccggttgatttcgtcttcaacatctccgagggccgcggcgcctaccgttca
cgggaagcccaggtgccgtcggtactggaaatgctgggcataccctattcgggggcggat
ccgcagaccctggctattgccctggacaagccgctgaccaagcaaatcgtccagttggcc
ggggtgaagaccccgcaatggcgcttcttcgctaaacctgaagaggctagacatgcagac
tgggatgacttccggtttcccgccttcgtgaagccggctttcgaaggttccagcaagggc
atccgcctgacgtcgaccgccggtagtcctgcggaggtaattgatcacgtcgaaaagctt
ttcgaaggttacgggcaggctgtgatagctgaagagtttatcgatggcgatgaagtcacc
tgcggtgtcatcggcaatatctccccgggcaagccccaacccctggtgctgcctatgcgc
atcgtgccccggcagaaaaatggcccgtttatctattccctcgaggtcaagcgggactac
aaaaagctggtcgactacgagtttccggcacagcttccgccggctgtcattgatcgcatc
aaatcgcaggcgctcaccgttttcggcacccttggttgccgggatttcacccgcatggat
ttccgcatcgccgcggacggcacgccgcattttctggaggtcaacccgttgcccggttta
tcgctggacagcgatctgttcatcattgccaccggaatgggatggagccatgccaggttg
attgtgaccatcctggaaaacgccatttcccgatacccttag

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