KEGG   Dehalogenimonas formicexedens: Dform_02121
Entry
Dform_02121       CDS       T04654                                 
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
dfo  Dehalogenimonas formicexedens
Pathway
dfo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dfo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dform_02121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dfo03019]
    Dform_02121
   03110 Chaperones and folding catalysts [BR:dfo03110]
    Dform_02121
   03029 Mitochondrial biogenesis [BR:dfo03029]
    Dform_02121
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dfo04147]
    Dform_02121
Enzymes [BR:dfo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     Dform_02121
Messenger RNA biogenesis [BR:dfo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Dform_02121
Chaperones and folding catalysts [BR:dfo03110]
 Heat shock proteins
  HSP60 / Chaperonin
   Dform_02121
Mitochondrial biogenesis [BR:dfo03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    Dform_02121
Exosome [BR:dfo04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Dform_02121
  Exosomal proteins of other body fluids (saliva and urine)
   Dform_02121
  Exosomal proteins of breast cancer cells
   Dform_02121
  Exosomal proteins of colorectal cancer cells
   Dform_02121
  Exosomal proteins of bladder cancer cells
   Dform_02121
SSDB
Motif
Pfam: Cpn60_TCP1 Mur_ligase_C
Other DBs
NCBI-ProteinID: APV45430
UniProt: A0A1P8FAF8
LinkDB
Position
complement(2011284..2012894)
AA seq 536 aa
MAKQIIFGEQVRKSLQRGINTLADTVKVTLGPKGHPVALSKPWGAPTVIDDGVTIARDID
LPDPFENMGAQIVKEAASKTNDAAGDGTTTSIMLAHAIITEAFKNITAGSEPIALKRGIE
KATAAVAKELKRMSTPIRGREQIVQVATITAKDPEIGELIADVMEKVGKDGVITIEESKG
LKYQTDYVEGLQFDRGYISAYFVTDTGRMEAVLEDPMILITDRKIETMGELLPALEKILQ
WTRTLVIIAENVEGEALATLVVNKMKGTLNILAVKAPGFGDRQKQMLEDIAILTGGRVIS
KEAGRKLDSVTEEDMGRAHRVTTNKDKTVIVDGAGTPEAIKDRIKHIKAQIDEVESAFDR
EKLQERQAALAGGVAIIAVGAATETEMKERKARVEDALAATRAALEEGILPGGGVGLINA
LPALDKLNLEGDEATGAQIVKRALPTPVRWIATNAGRDGAVVFDKVRTSPPGVGYNAEAD
EWGNMVDMGIIDPTMVVRSALENAASVANMVIITNSLVADIPEKKVEAPPPAGDFG
NT seq 1611 nt   +upstreamnt  +downstreamnt
gtggcaaaacagattattttcggagaacaggtacgcaagtccttgcagagaggcattaac
accctggccgataccgtaaaagtcaccctcggccccaagggtcacccggtcgccctttcc
aaaccgtggggcgctcccaccgtcatcgacgacggcgtcaccatcgcccgcgatatcgac
ctgccggatccttttgagaacatgggcgctcagatcgtcaaggaagctgcttccaagacc
aacgacgccgccggcgatggcaccaccacttccatcatgctggctcacgccatcattacc
gaggccttcaagaacattaccgccggttcggagcccatcgccctgaagcgcggcattgag
aaagccaccgcggctgttgccaaggaactcaagcggatgtccaccccgatccgcggccgc
gagcagatcgtccaggttgccaccattaccgctaaagatcctgaaatcggcgagcttatt
gccgacgtcatggagaaagtcggcaaggacggcgtcatcaccatcgaagagtccaagggc
ctcaaataccagaccgattatgtcgaaggcctgcagttcgaccgcggctacatctcggcc
tactttgtgaccgataccggccgcatggaagccgtcctcgaggatccgatgatcctcatc
accgaccgcaagatcgaaaccatgggtgagctcctgcctgccctggaaaagattctgcag
tggacccgcaccctggtcatcatcgccgagaacgtcgagggcgaggccctggccacgctc
gtcgtcaacaagatgaagggtaccctgaacatcctggccgtcaaagcgccgggcttcggc
gatcgccagaagcagatgctggaagacatcgccattctcaccggcggccgcgtcatttcc
aaggaagccggccgcaagctggattccgttaccgaggaagacatgggccgcgcccaccgc
gtcaccaccaacaaagacaagacggtcatcgttgacggcgccggcaccccggaagccatc
aaagaccgcatcaagcacatcaaggctcagatcgacgaggtcgagagcgcttttgaccgc
gagaagctgcaggagcgccaggctgccctcgccggcggcgttgccatcatcgccgtaggc
gcggccaccgagaccgaaatgaaagagcgcaaggcccgcgtcgaagacgccctggccgcc
acccgcgccgctcttgaagaaggcatcctccccggcggcggcgtcggcttgatcaacgcc
ctgcccgccctggataaattgaacctggaaggcgatgaagctaccggcgctcagatcgtc
aagcgcgccctgcccactccggtccgctggatcgccaccaatgccggccgcgacggcgcc
gtggtcttcgacaaagtccgcacttctccccccggtgtcggttacaacgccgaggccgat
gaatggggcaacatggtcgacatgggcatcatcgatcccaccatggtcgtccgctccgcc
ctggagaatgccgcctccgtggccaacatggtcatcatcaccaactccctggtggccgat
atcccggagaagaaggtcgaagctccgccgcccgccggcgacttcggctag

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