Desulfoscipio gibsoniae: Desgi_0318
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Entry
Desgi_0318 CDS
T02657
Name
(GenBank) lysyl-tRNA synthetase (class II)
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Desgi_0318
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dgi01007
]
Desgi_0318
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dgi03016
]
Desgi_0318
Enzymes [BR:
dgi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Desgi_0318
Amino acid related enzymes [BR:
dgi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Desgi_0318
Transfer RNA biogenesis [BR:
dgi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Desgi_0318
Prokaryotic type
Other AARSs
Desgi_0318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AGK99903
UniProt:
R4KBE7
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All DBs
Position
301836..303347
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AA seq
503 aa
AA seq
DB search
MSSDKSNQDVNVSRSQSEDINELIRVRLAKLAEFKEQGLNPYGGKYERTHTAREILDNFE
GFESRQVSLAGRVMAKRGHGKAGFANIQDSTGQIQIYARLNDIGEQAYDLFTKLDIGDIV
GVTGKIFKTRMGEITLAVETLRLLSKSLRPLPEKWHGLKDVELRYRQRYVDLIVNPDVKE
AFIKRSRIIQAIRGYLDQRGFLEVETPMMHSIAGGAAARPFITHHNTLDMDLFLRIAPEL
YLKRLLVGGFERVYEINRNFRNEGISTKHNPEFTMLELYQAYADYHDMMDLAEDLICTVA
EQVLDTNVVRYGDVDISLAKPWARVPMLEAVKKYSGVDFESLSTGDEAYAAVQQLPVEVE
RGESWGAILNKVFEEMVEPNLMQPTFIYDYPLDISPLAKKKEDRPDLTYRFELFIYGREM
ANAFSELNDPLDQKERFLSQLEKRRAGDDEAHMMDEDYVNALEYGMPPAGGLGIGIDRLV
MLLTNAASIRDVILFPLMKPRES
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgataaatcaaatcaagatgtaaatgtatcccgttctcaaagcgaggatatc
aatgagttgatacgagtgcggctggccaaattggctgaattcaaggagcagggcctcaat
ccctatggaggaaaatacgagcgtacacacacggcccgtgaaatactggataattttgag
ggttttgaaagccggcaggtttccctggccggccgggttatggctaaacgggggcatggt
aaggctggttttgccaacatacaggatagcacgggtcaaatacaaatttatgctcgttta
aacgacattggcgagcaggcatatgacctgtttacgaaactggatataggcgatattgtg
ggggtaaccggcaaaatctttaaaacccgtatgggtgaaatcaccctggcggtggagaca
ctgcgcctgttaagcaaatctttgcgtcccctgcctgaaaaatggcatggtttaaaagat
gtagagctgcgctaccggcaacgttatgtggatttaattgtcaacccggacgttaaggaa
gcatttataaagcgcagccggattattcaagctattagagggtatttagaccagcggggc
tttttggaagtggaaacacccatgatgcattccatcgccggcggagcggcggcccggccc
tttattacccatcacaatacgttggatatggacctgtttttgcggattgccccggagctt
tatttaaagagactgctggtgggcggctttgagcgggtatatgaaattaaccgcaatttc
cgcaatgagggtatcagtaccaaacataaccccgagtttaccatgttggagctctaccag
gcctatgccgactatcacgacatgatggacctggctgaagaccttatttgtactgttgcc
gaacaggtgttggacaccaatgtggtgcgctatggcgatgttgatataagtctggccaaa
ccctgggcccgggtacccatgttggaagcagtcaaaaaatatagcggagtggacttcgag
tcgctgagtacaggtgacgaagcttatgcggccgtgcagcaattgcctgtcgaggtggag
cgcggtgaatcctggggtgccattctaaacaaggtgtttgaggaaatggttgagcccaat
ttaatgcaacccacatttatatatgattatccactggacatatcgcccctggccaagaaa
aaagaggacaggcccgaccttacctaccggtttgagttgtttatttacgggcgggaaatg
gccaacgccttttccgagctaaacgacccgctggatcagaaggaaaggtttttgagccag
ctggaaaaaaggcgggccggtgacgatgaggcgcacatgatggacgaagactacgtcaat
gcactggaatacggtatgccacctgcggggggattgggcatcggcattgacaggttggtg
atgcttttgacgaatgctgcgtccataagggatgttattttgttcccgttaatgaagccg
cgagagagttag
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