Desulfoscipio gibsoniae: Desgi_2840
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Entry
Desgi_2840 CDS
T02657
Name
(GenBank) ribosomal RNA small subunit methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
dgi
Desulfoscipio gibsoniae
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dgi03009
]
Desgi_2840
Enzymes [BR:
dgi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
Desgi_2840
Ribosome biogenesis [BR:
dgi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Desgi_2840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
Methyltransf_31
Methyltransf_25
Ubie_methyltran
FtsJ
Fibrillarin
Methyltr_RsmF_N
PCMT
Methyltransf_15
DUF938
NSUN5_fdxn-like
Motif
Other DBs
NCBI-ProteinID:
AGL02241
UniProt:
R4KRK5
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Position
complement(2881343..2882743)
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AA seq
466 aa
AA seq
DB search
MTQKISARETALKVLLAVEEREAYANLALGAVLDKMNPGKLDRAFITELVYGTLRTQNTL
DWALSRYLRRSLPELTAAVRNILRLGTYQILFMDRVPDSAAVNESAILARRHGHEGIVKF
VNGVLRNLVRGKKQLNYPDPNEDPVQYIALRHSHPAWLVRRWLNDFGFAETEALCAANNQ
PAPNTVRVNTLKTSAAELIEKLATLGVKATRGQYAVDCLQLQGFVSLGGLAPFKEGLLQA
QDESSILVGQAVRPAPGSRVLDVASAPGGKATHLAQLMQNQGVIMALDVHEHKIKLIEEN
CRRLGVQIVQPVLADARQIPEKYTGWADYVLVDAPCSGLGVLRRRPDARWRKGEEQLAAL
AELQAQILESAAAVLKPGGVLVYSTCTITCEENLGQVKSFLHKHADFQWESLAELLPDSL
DYTATMGRGYLQLLPHIHGLDGFFIARLRKSDNMPLTSQQDLYGRV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
ttgacgcaaaaaataagtgccagggaaaccgctttaaaagtgctgcttgcggtagaggaa
cgggaagcctacgccaatctggccctgggtgcggtgctggacaagatgaacccgggcaaa
ttagaccgggcttttatcaccgagctggtttacggaacactgcgcacccaaaatacgctg
gattgggcgctaagccgctacctgcggcggtcattgcccgaattaaccgctgcggtgcgg
aatattttacgtttagggacttaccaaattttatttatggaccgggtgcctgattccgct
gcagttaatgagtcggccattttggcccgccggcatggccatgaaggcattgttaaattt
gttaacggtgtgctgcgtaatttagtacggggcaagaagcaattaaactaccccgaccct
aacgaggatccggtgcagtacatagctttgcgccactcccatccggcctggctggttcgc
cggtggctcaatgattttggatttgcagaaacagaggcactttgtgcagccaataatcaa
cccgcgcctaataccgtgcgggtaaatactttaaaaaccagtgctgcggaattaatcgaa
aagctggccactctgggggtgaaagccacaagaggtcaatacgctgtagattgtcttcag
ctgcagggatttgtatccctgggcggtttggcaccgtttaaagaagggctgttgcaggct
caggatgaaagttccatactggtggggcaagccgtgcgtcctgcaccgggatcccgggtg
ctggatgtagccagcgccccgggtggtaaagccacccacctggcccaattgatgcaaaac
cagggcgtcattatggcccttgatgtgcacgagcacaaaataaaactgattgaggaaaac
tgtaggcgtctgggtgtgcaaatagtgcagccggttttggccgatgccaggcaaatacct
gagaagtatactggttgggctgattacgtactggtggatgctccctgctccggtttaggc
gtgctgcgcaggcgcccagatgccagatggcgcaagggtgaagagcaacttgccgcttta
gctgaactacaagcgcaaatcttagagtccgctgcagcggtgttaaaaccaggcggggtg
ctggtatacagcacttgcacaattacctgtgaagagaatctggggcaggtgaagtcattt
ttacataagcatgctgattttcaatgggagtccctggctgaattattacccgacagcctt
gactatacagctaccatgggccggggttatctacaattattacctcatatccatggcctg
gacggcttttttatagccaggctgcgaaaaagcgataatatgccgctaacctcccagcag
gatttgtatggcagagtgtag
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