Dendronephthya gigantea (soft corals): 114521323
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Entry
114521323 CDS
T06112
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1-like isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
dgt
Dendronephthya gigantea (soft corals)
Brite
KEGG Orthology (KO) [BR:
dgt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dgt03019
]
114521323
Messenger RNA biogenesis [BR:
dgt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114521323
Factors involved in mRNA localization
Other mRNA localization factors
114521323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
CpG_bind_C
BP28CT
Motif
Other DBs
NCBI-GeneID:
114521323
NCBI-ProteinID:
XP_028397526
LinkDB
All DBs
Position
Unknown
AA seq
1268 aa
AA seq
DB search
MDATNSLDEALKNVNLLDDLALCDEQPVIEAPAASLTYNPNFDTNFEDSEAFITCNSKYL
EEAAMHRGLVDSIRLNIKFIEVVNEMLEQGESYAVMLYTWRCCSRAIPSVKSDDQPNRVE
IYEKTVSVVEPEINKLKTFMDFAENAVSRFCQEVKTLCHPERRKDFISETYLLTMGKVLN
MFAVLDALKDMKACINNDYSCFKRANGFLKRGTVDAAAIELSQKLSLFLATKNKIRDILK
DGLEKIPGFDELLSDVVNLCCKLYEQNMYLLPKDKHMLLKVIGFSLFLMDGNVTQIAKLD
QKKRINIAKIDKFFKQLPVVPLFGDMQIELVSYVKMCPNFKADADKWTCAGGNAEEKIIS
QYNLLSKMDTIREEHLHYISELARYNNEMITSSTAPRNASQHLELRKLALRGLQLLSSWN
TQLMELYSWKLIHPTDKYANPHCPEQAEDYERATRYNYTSEEKYALVEVIAFIKGLYVLM
LKLEIVFCEAIRHSIHNDLQKFIQITLREPLRKVIKKKQATLVKTVLMTIRDTGSDFASD
IRKKREDPILKGEKDSKTGYQVTLPDRDVGPSSTQLYMVRTTLESLISEKAGKKSMRKEL
EKETVEAIEQFLKLSFFFRHLLHFSETLRECCDLSQLWFREFFLELTMGKRIQFPIEMSM
PWILTEHILDSQEPSMMEYVLYPLDLYNDSGEYAQSKFKKQYLYDEIEAEVNLCFDQFVY
KLSEHIFAYFKAQACSMILAKKFVSECSTQKLGKINAPPSNLYETLLKQRHVQLLGRSID
LNRLLTQRINTAMLKSMDCAIARFESGSLCGIVELENLLDVIHQTHKLLSKYMTLIPYDA
MLKEVNHCVSAPYGRTTLHVFWELNFDFLPNYCYNSATNRFVKTPLSFVEEVQRENPPKA
AHHYFFGTKAQNAAFASINALYNSFVGPAHFESMTRLLGYQGIAVVIEELLKVIKSLVQG
QLKQYIVELIQGLPKKCGLPRYEYGSKAVLEYYHAHLEPLVQYSYLRTDVFQAFREIGNG
VLFIILIEQSMSIDEVLDLLQAAPFQGIIPRPYLQEGEKLESKMKKLEQQYAPFQVVSLI
SKLGTKEQLNIAQEGELLTKERLCCGLSLVEVMLKRIQSFLHDEVWQTSIPQNGVMTVEE
CKDFHSLWSAILFIICQPIGQNEYSVEQLFGEGLYWAGCSFVVLLSQQKRFEALDFCSHI
VKVYDVDPRDETVGGVSLKRLVEKARNVKVLNQQIFASLNKYLKSSESSLEQVRCFQPPV
HHPYVSSI
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggatgcgacaaactctcttgacgaagccttaaagaatgttaatttactcgatgattta
gctttgtgtgatgaacagccagttattgaggcaccagctgcctcactcacatataatcct
aactttgacacaaattttgaagacagcgaggcatttatcacatgtaacagcaaatattta
gaggaagccgcgatgcaccgaggtctagttgattcaatcagattaaacataaagtttata
gaagttgtcaatgaaatgcttgaacaaggcgaatcatatgctgtgatgctttatacttgg
agatgttgttctcgagcaatcccatcagtgaaaagtgatgaccaacctaacagagttgaa
atttatgagaaaactgttagtgttgttgaacctgaaatcaataaattgaaaacctttatg
gactttgctgagaatgctgtttcaagattttgtcaagaagtaaaaacattatgccatcct
gagagaagaaaagatttcatttctgagacatatttgttgaccatgggtaaagttctaaat
atgtttgctgtattggatgctctcaaagatatgaaggcttgtatcaataacgactactcc
tgttttaagagagctaatggctttcttaaacgcggtacagtggatgccgctgccatcgaa
ttatcccagaagttgtctttatttctggcaacgaagaacaagatcagagatattcttaaa
gatggtttagaaaaaattccaggatttgacgaactcttatctgatgttgtcaacttgtgt
tgtaagctttatgaacaaaatatgtatttactacccaaggataaacatatgttactcaag
gtgattggctttagtttgtttctcatggatggcaatgtcacacaaattgcaaaacttgat
caaaagaaacgtataaatattgcaaaaattgataaatttttcaagcaactacctgtggtt
cctctctttggtgatatgcagattgaactcgtgagttatgtaaaaatgtgtccaaacttc
aaggctgatgctgataaatggacttgcgctggaggaaatgctgaagaaaagatcatttct
caatataatctgctttccaagatggacacaatacgtgaagaacatttgcattatattagt
gaactggcgcgttataacaacgagatgatcacatcaagcacagcgccaagaaatgccagc
cagcatcttgagttgcgaaaacttgctttgcgtggtttacagttgttatcaagctggaat
acgcaattaatggaactgtattcatggaagttgatccatcctaccgacaagtatgctaac
ccacattgtcctgaacaagctgaagattatgaaagggcaacaaggtacaattacaccagt
gaggaaaaatatgccttggtagaggtcattgctttcatcaaaggtttatacgtgttgatg
ctgaagttggagattgtgttttgtgaagcaatcagacattctattcacaatgatttacag
aagtttattcagatcacattaagagaacctctgaggaaagtgatcaagaaaaaacaagca
acgcttgttaaaacagtccttatgacaatacgagacacgggttcagattttgcgagtgac
atcaggaaaaaacgcgaagatccaattctgaaaggcgagaaagattccaaaactggctac
caggtcaccttgccagacagagatgtgggaccttcaagtactcagctttacatggtgcga
actacactcgagtcgcttatttctgagaaagctggcaagaagagcatgcgcaaagaatta
gagaaggaaacagttgaagcaattgaacagttcctgaaattgtctttctttttccgtcat
ttgttacatttcagtgaaacattacgagaatgttgtgatctttcacaattgtggtttagg
gagtttttcttggaacttactatgggtaaacgaatacagtttccaattgagatgtcaatg
ccatggattttgacggaacatattttggacagtcaagagcccagtatgatggagtatgta
ttgtatcctttggatttgtataatgacagtggagagtatgcgcagtcgaagtttaagaaa
caatatttatacgacgaaattgaagcggaggtcaacttgtgttttgatcaatttgtgtac
aaactgagtgaacatatttttgcctattttaaggctcaggcttgcagcatgatccttgca
aagaaatttgtctcagagtgttcaacacaaaaacttgggaagataaatgctcctccctcg
aatttgtatgaaactttgttgaaacaacgccatgtacaattacttggacgttcaattgat
ctgaatcgtctgcttacgcaacgtatcaacaccgccatgttgaaatctatggactgtgct
atcgcgaggtttgaaagtggaagtttatgtggaattgtggaactggagaacttattagat
gttatccaccaaacacacaagttattgtcgaagtacatgacactcataccatacgacgcg
atgttgaaggaagtaaatcattgtgtttctgctccttatggtagaacaactcttcatgtt
ttctgggagttaaattttgattttcttccaaactactgttataactcagcaacaaacagg
tttgttaaaacgccgttatcgtttgtcgaagaagtacaacgagagaatcctcccaaagcg
gcgcatcattatttctttggcaccaaggctcagaatgcagcatttgccagcattaatgca
ttgtataacagctttgttggccctgcacattttgaatcaatgacaagacttttgggttat
caagggatagctgttgttattgaagagttgctcaaagttatcaaaagtttggtacaaggt
caattgaaacaatacatcgttgagttgatacaaggtctaccaaagaagtgtggtttaccg
cgatatgaatatggatcaaaagccgtcttggaatattaccacgcccatttggagccccta
gtccagtacagttatctaagaactgatgtctttcaagcattccgagaaattggaaacgga
gttttgtttattattttaattgaacagagcatgtcaatcgacgaagtccttgatttactg
caagctgccccattccagggtattataccaagaccatatcttcaagagggtgaaaagttg
gagagtaaaatgaagaaacttgaacaacaatatgcaccatttcaagtcgtttccttgata
tccaaattgggcactaaagaacaactgaacattgctcaagagggggaacttcttacaaag
gaaagattatgttgtggtttatcgttagttgaagtgatgttaaagagaattcaatcattt
cttcacgatgaagtatggcagacatcaatacctcaaaatggcgtcatgacagttgaggaa
tgtaaagattttcattctttatggagtgctatattattcattatctgtcaacccattgga
cagaatgaatattctgttgagcaattgtttggtgagggtctttactgggccggttgttca
ttcgtcgtattgctgagtcaacaaaaaagatttgaagcactagatttttgttcacatatt
gtgaaggtttatgacgttgatcccagagatgaaacagttggaggagtgagtctaaaacgt
ctcgtggagaaagcaaggaacgtaaaagttttgaatcaacaaatatttgcctctctcaat
aaatatttgaagtcaagtgaaagttccttggaacaagttcgatgctttcaaccgcccgtt
caccatccttacgtctcttccatctaa
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