KEGG   Acidovorax ebreus: Dtpsy_1095
Entry
Dtpsy_1095        CDS       T00853                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
dia  Acidovorax ebreus
Pathway
dia02024  Quorum sensing
dia03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dia00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Dtpsy_1095
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Dtpsy_1095
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dia03019]
    Dtpsy_1095
   03036 Chromosome and associated proteins [BR:dia03036]
    Dtpsy_1095
Messenger RNA biogenesis [BR:dia03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Dtpsy_1095
Chromosome and associated proteins [BR:dia03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Dtpsy_1095
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: ACM32572
UniProt: B9MFY1
LinkDB
Position
1143553..1143804
AA seq 83 aa
MSNKGQLLQDPFLNALRREHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAI
STIVPGRAVNFSTAEPAADGDNQ
NT seq 252 nt   +upstreamnt  +downstreamnt
gtgagcaataaaggtcagcttcttcaagaccccttcctgaacgccttgcgtcgggagcat
gtgccggtttcgatttatttggtgaacggcatcaaactgcagggtcaaatcgaatccttc
gatcaatacgtcgtgctgctgcgcaataccgtgacgcagatggtgtacaagcacgccatt
tccacgattgtgcctggtcgtgccgtcaacttctcgactgcggaacccgccgccgacggg
gacaaccaataa

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