Acidovorax ebreus: Dtpsy_3245
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Entry
Dtpsy_3245 CDS
T00853
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dia
Acidovorax ebreus
Pathway
dia03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dia00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Dtpsy_3245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dia03021
]
Dtpsy_3245
03400 DNA repair and recombination proteins [BR:
dia03400
]
Dtpsy_3245
Enzymes [BR:
dia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Dtpsy_3245
Transcription machinery [BR:
dia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Dtpsy_3245
DNA repair and recombination proteins [BR:
dia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Dtpsy_3245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
ACM34674
UniProt:
B9MH46
LinkDB
All DBs
Position
complement(3459402..3463631)
Genome browser
AA seq
1409 aa
AA seq
DB search
MKSLLDLFKQFTPDEHFDAIKIGMASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSL
PSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKFGIMSEDDYDAKRKEYGDEFVAKM
GAEGIKELLEGIDIEIEIEKLRGDLTGSEVKVKKNAKRLKVLEAFKKSGIKPEWMILEVL
PVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQEA
VDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGPTLK
LHQCGLPKLMALELFKPFIFSRLEAMGIATTIKAAKKEVEAGTPVVWDILEEVIKEHPVM
LNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQLEART
LMLASNNVLFPASGEPSIVPSQDVVLGLYHATREKINGKGEGLVFADTGEVQRALDAGEA
ELHAKISVRLTEWTKDKATGEFVPETKLVDTTVGRALLSEILPKGLPFSNLNKALKKKEI
SKLINASFRKCGLKDTVVFADKLLQNGFRLATHAGFSVAIDDMLVPPQKAEILARAEAEV
KEIEQQYVSGLVTAGERYNKVVDIWGKAGDDVSKVMMDQLKVQKTIDRNGKEVNEESFNA
IYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARK
GLADTALKTANSGYLTRRLVDVTQDLVVTEDDCGTSNGSLMRAIVEGGEVIESLRDRILG
RTAAEEVLHPETRAVLAQPGRMLDEDLIEELEAAGVDEVKVRTALTCETRYGLCAKCYGR
DLGRGGLINLGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSNGIIGFN
ATMRYVTNTKGELVVIARSGEIIIQDEHGRERERHKVPYGATLTVKADQTIKAGTILANW
DPLTRPIITEYAGTVKFENVEEGLTVAKQVDEVTGLSTLVVIDPKRRGSAKVVRPQVKLV
DADGKEVKIPGTDHSVTIGFQVGALIQVRDGQEVGPGEVLARIPMEGQKTRDITGGLPRV
AELFEARSPKDKGMLAEMTGTISFGKETKGKVRLQITDPDGKVWDELVPKEKNVLVHEGQ
VVNKGELIVDGPADPQDILRLLGIEELSRYIVDEVQDVYRLQGVKINDKHIEVIVRQMLR
RVVVENPGESTYIAGEQVERSEILNTNEALQAEGKLPATYSNVLLGITKASLSTDSFISA
ASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGLAYHQARKAKDAMDEAERRA
IADAEAAELASAGTDDAAAEIDGSADTAD
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgctactcgacctgttcaagcaattcacgccggatgagcacttcgatgccatc
aagatcggcatggcctcgcccgagaagatccgttcgtggtctttcggcgaagtgaagaag
cccgagaccatcaactaccgcacgttcaagcccgagcgcgatggcctgttctgcgccaag
atttttggtcccatcaaggactacgagtgcctgtgcggcaagtacaagcgcctgaagcac
cgcggcgtgatttgcgagaagtgcggtgttgaagtcacgcagaccaaggtgcgccgcgag
cgcatgggtcacatcgacctggccgcgccctgcgcgcacatctggttcctgaagtcgctg
ccttcgcgtctgggcctggtgctcgacatgacgctgcgcgacatcgagcgcgtgctgtac
ttcgaagcctacgtggtgaccgaccccggcatgaccccgctgaagaagttcggcatcatg
tccgaggacgactacgacgccaagcgcaaggaatacggcgacgagttcgtcgccaagatg
ggcgccgagggcatcaaggagctgctggaaggcatcgacatcgagatcgagatcgagaag
ctgcgcggcgacctgacgggctccgaagtcaaggtcaagaagaacgccaagcgcctgaag
gtgctggaggccttcaagaagtccggcatcaagcccgagtggatgatcctggaagtgctg
cccgtgctgccgccggacctgcgtccgctggtgccgctggacggtggccgcttcgccacg
tcggacctgaacgacctgtaccgccgcgtcatcaaccgcaactcgcgcctgcgccgcctg
ctggagctgaaggcgcccgagatcatcgcgcgcaacgaaaagcgcatgctgcaggaagcc
gtggacagcctgctggacaacggccgccgcggcaaggcgatgacgggcgccaacaagcgt
gccctgaagtcgctggccgacatgatcaagggcaagtcgggccgcttccgccagaacctg
ctgggcaagcgcgtggactactcgggccgttccgtgatcaccgtgggtccgacgctcaag
ctgcaccagtgcggcctgcccaagctgatggctctggagctgttcaagcccttcatcttc
tcgcgcctggaggccatgggcattgccacgaccatcaaggctgccaagaaggaagtggaa
gccggcacgcccgtggtgtgggacatcctggaagaggtcatcaaggaacacccggtgatg
ctcaaccgtgcgcccacgctgcaccgtctgggcatccaggcgttcgagcccatcctgatc
gaaggcaaggccatccagctgcacccgctggtctgcgccgcgttcaacgccgacttcgac
ggtgaccagatggccgtgcacgtgccgctgtcggtggaagcgcagctggaagcccgcacg
ctgatgctggcctccaacaacgtgctgttcccggcctcgggcgagccctccatcgtgccc
tcgcaggacgtggtgctgggcctgtaccacgccacccgcgagaagatcaacggcaagggc
gaaggcctggtgttcgccgacaccggcgaagtccagcgcgcgctggatgccggcgaggcc
gagctgcacgccaagatcagcgtgcgcctgaccgagtggaccaaggacaaggcgacgggc
gagttcgtgcccgagaccaagctcgtggacaccaccgtgggccgtgcgctgctgtcggaa
atcctgcccaagggcctgcccttcagcaacctgaacaaggcgctgaagaagaaggaaatc
tccaagctcatcaacgcgtcgttccgcaagtgcggcctgaaggacaccgtggtgttcgcc
gacaagctgctgcaaaacggcttccgcctggccacgcacgcgggcttttccgtggcgatc
gacgacatgctggtgccgccgcaaaaggccgagatcctggcccgcgccgaagccgaggtg
aaggagatcgagcagcagtacgtctccggtctggtgacggccggcgagcgctacaacaag
gtggtggacatctggggcaaggccggcgacgacgtgtccaaggtgatgatggaccagctc
aaggtccagaagaccatcgaccgcaacggcaaggaagtgaacgaggaatcgttcaacgcc
atctacatgatggccgactccggcgcccgcggctcggcggcccagatccgtcagctggcc
ggtatgcgcggcctgatggccaagcccgatggctcgatcatcgagacgcctatcaccgcg
aacttccgcgaaggcctgaacgtgttgcagtacttcatctccacccacggtgcccgtaag
ggcctggcggatacggcgttgaagaccgcgaactcgggttacctgacccgtcgcctggtg
gacgtgacgcaggacctggtggtgaccgaggacgactgcggcacctcgaatggttcgctg
atgcgcgccatcgtcgagggcggtgaagtcatcgagtccctgcgcgaccgtatcctgggc
cgtaccgcggccgaggaagtgctgcaccccgaaacgcgtgccgtgctggcgcagccgggc
cggatgctcgatgaagacctgatcgaagagctcgaagccgcaggcgtggacgaagtgaag
gtgcgtaccgcgctgacctgcgaaacccgctacggcctgtgcgccaagtgctacggccgc
gacctgggccgcggcggcctgatcaacctcggcgaagccgtgggcgtgatcgccgcgcag
tccatcggcgagcccggcacgcagctgaccatgcgtacgttccacatcggtggtgcggca
tcgcgtgcggcggtggcgtccagtgtggaagccaagtccaacggcatcatcggcttcaac
gccacgatgcgctacgtgaccaacaccaagggcgagctggtggtgattgcgcgctcgggt
gaaatcatcatccaggacgagcacggccgcgagcgcgagcgccacaaggtgccgtacggc
gcgacgctgacggtgaaggccgaccagaccatcaaggccggcaccatcctcgccaactgg
gacccgctgacgcgcccgatcatcaccgagtacgcaggtacggtgaagttcgagaacgtc
gaggaaggcctcacggtggccaagcaggtggacgaggtcacgggcctgtccacgctggtg
gtgatcgaccccaagcgccgcggctctgccaaggtggtgcgtccgcaggtgaagctggtg
gacgccgatggcaaggaggtgaagatccccggtaccgaccactcggtgacgatcggcttc
caggtcggcgcgctgatccaggtgcgcgacggccaggaagtgggccccggcgaagtgctg
gcccgcatcccgatggaaggccagaagacccgcgacattaccggcggtctgccgcgcgtg
gccgagctctttgaagcccgcagccccaaggacaagggcatgctggccgagatgaccggc
acgatctccttcggcaaggaaaccaagggcaaggtgcgcctgcagatcaccgatccggac
ggcaaggtctgggacgagctggtgcccaaggaaaagaacgtgctggtccacgaaggccag
gtggtcaacaagggcgagctgatcgtcgacggcccggccgatccgcaggacatcctgcgc
ctgctgggcatcgaggagctgtcgcgctacatcgttgacgaagtgcaggacgtgtaccgc
ttgcagggtgtgaagatcaacgacaagcacatcgaggtgatcgtgcgccagatgctgcgc
cgcgtcgtggtcgagaacccgggcgagtccacctacatcgccggcgagcaggtggagcgt
tccgagatcctcaacaccaacgaggcgctgcaggccgaaggcaagctccctgccacgtac
tccaacgtactgctgggcatcaccaaggcgtcgctgtccaccgactcgttcatctccgcc
gcgtcgttccaggaaacgacccgcgtgctcaccgaggctgccatcatgggcaagcgcgac
gagctgcgcggcttgaaggagaacgtgatcgtgggccgtctgatccccgccggcacgggc
ttggcttaccaccaggcgcgcaaggccaaggacgccatggacgaggccgagcgccgcgcc
atcgcggatgccgaagccgccgagctggcctctgccggcaccgacgacgcagccgccgag
atcgacggcagcgccgacacggctgattaa
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integrated database retrieval system
