Desulfurispirillum indicum: Selin_1546
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Entry
Selin_1546 CDS
T01383
Name
(GenBank) apurinic endonuclease Apn1
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
din
Desulfurispirillum indicum
Pathway
din03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
din00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Selin_1546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
din03400
]
Selin_1546
Enzymes [BR:
din01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Selin_1546
DNA repair and recombination proteins [BR:
din03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Selin_1546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
PRMT5_TIM
Motif
Other DBs
NCBI-ProteinID:
ADU66279
UniProt:
E6W7B2
LinkDB
All DBs
Position
complement(1687317..1688168)
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AA seq
283 aa
AA seq
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MATPLLLGAHTSTAKGLHLCFERAQEIGATAVQIFTRNQRQWKARPVTAEEVTLFRRTRE
RVGMAQVISHASYLLNLANPDSGKRQLCVDALVAEYERCTLLGIEQLVLHPGAHLQSGLE
VGVGHIAQTLDAVLEQVDHNIGPRLVLENVAGQGTTIGSTVAELGMILERCVHGAELGIC
IDTAHAFAAGYDFRHADGLEGLLAEVQDAVGFSRLSMLHLNDSQAVLASRRDRHARIGEG
EIGLVAMRQVVHHPRLRNLPMILETPAGMEGWAREIDLLRVPL
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaccgcttctgctgggcgcccataccagcaccgcgaaagggctgcacctctgt
ttcgagcgtgcccaggagatcggcgccacggcagtgcagatattcacccgcaaccagcga
cagtggaaggcccgaccggttactgcggaagaagtcacccttttccggcgcacccgggag
agggtgggaatggcgcaggtcatctcccatgcttcttacctgctgaatctggccaatccc
gactccgggaagcgacagctctgcgtggatgcgctggtggctgaatacgagcgctgtacc
ctgctgggaatcgaacaactggtgctgcatccgggggcgcatctgcaatcggggttggag
gtgggggtcgggcacattgcccagaccctggatgcggtactggagcaggttgaccacaat
attggcccccgactggtgctggagaacgtggccggccagggtaccaccataggctcgacc
gtggctgaactgggcatgattcttgagcggtgtgtccacggtgccgagcttggaatatgc
attgacacggcccacgcctttgccgctggctatgattttcgccacgctgatggtctggag
gggttactggccgaggttcaggatgccgttggcttttctcggctgagcatgctccatctc
aatgattcccaggctgtcttggcttcacgtcgcgatcggcacgcccgcatcggcgagggg
gaaatcggccttgtggccatgcggcaggtggtgcaccatccgcgattgcgcaatctgccc
atgattctggaaactccggcgggaatggaaggctgggccagggaaattgacctgctgcgc
gtgcccctatga
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