Dyella japonica: HY57_18575
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Entry
HY57_18575 CDS
T03215
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dja
Dyella japonica
Pathway
dja03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dja00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HY57_18575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dja03021
]
HY57_18575
03400 DNA repair and recombination proteins [BR:
dja03400
]
HY57_18575
Enzymes [BR:
dja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HY57_18575
Transcription machinery [BR:
dja03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HY57_18575
DNA repair and recombination proteins [BR:
dja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HY57_18575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Biotin_lipoyl
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AIF49111
UniProt:
A0A075K4I2
LinkDB
All DBs
Position
complement(4290241..4294455)
Genome browser
AA seq
1404 aa
AA seq
DB search
MKDLLNLFNQQRTAPDFDAIKIALASPELIRSWSYGEVKKPETINYRTFKPERDGLFCAA
IFGPVKDYECLCGKYKRMKHRGVVCEKCGTEVTLAKVRRERMGHIELASPTAHIWFLKSL
PSRIGLMLDMTLRDIERILYFEAFVVIDPGLTALERGQLLSEDQYLEAVEEHGDEFDARM
GAEAVYELLKSLDLPGEVVRLKEEIASTNSETKLKRLTKRVKLIEAFLESGNRPEWMVLT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLRRLLELNAPDIIVRNEKRMLQ
ESVDALLDNGRRGRAITGTNKRALKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPT
LRLHQCGLPKKMALELFKPFIFAKLQARGEATTIKAAKKLVEREEGQVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSIEAQLEA
RALMMATNNILSPANGEPIIVPTQDVVLGLYYMTRELVNAKGNGMVFSGIGEVRRAYDNR
AVQLHAKVKVRINQVQIDEDGNRTETTQIVDTTVGRALLLEIMPEGLPFALANTELTKKN
ISRLINQCYRRLGLKDTVIFGDQLMYTGFRFATRAGISIGIDDMIIPDQKKPILEEAEKE
VVEIQEQYQSGLVTAGERYNKVVDIWSRTNELVAKAMIDGIGTEKVVDAEGKTVNQKSMN
SLYIMADSGARGSVAQIRQLAGMRGLMARPDGSIIETPIKANFREGLNVLQYFNSTHGAR
KGLADTALKTANSGYLTRRLVDVAQDVVITFGDCGTDEGVTMQPIVEGGDVVEPLRDRVL
GRVALEDVYGPGEDNEPIVTRDTLLDEALVEKLDKAGVQSIKVRSPITCAADHGVCALCY
GRDLARGHLVNMGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAAVDNVTVKTTGTLK
FNNLKTVHHNQGHLVAVSRSGELSVIDANGRERERYKVPYGATIAVKDGDPVKAGQAVAN
WDPHTHPIVSEVAGTVRFIDFIDGVTVQSQTDELTGLESAVVTDPKRRGTAAKDLRPIVR
LEDAKGRELKLPGTDVPAQYMLPAGAIVSIQNGAQVGVGDVVARIPQETSKTRDITGGLP
RVADLFEARKPKEPAILAERSGVISFGKDTKGKQRLIIKDVDGNEHEELIPKWRQVIVFE
GEHVEKGETIVDGEPSPHDILRLLGVEPLAAYLVKEIQDVYRLQGVKINDKHIEAIIRQM
LRKVEITDPGESHYLRGEQVERVRINGENDRAIKRGERPAEFQSVLLGITKASLATESFI
SAASFQETTRVLTEAAVRGTRDTLRGLKENVIVGRLIPAGTGLAYHASRHRQGGLTASEL
ETLSGSASSASFAEATTGSDIGVE
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacttgctcaatctgttcaaccagcagcgcaccgcgcctgacttcgatgcgatc
aagatcgctctggcttcgccggagctgatccgctcgtggtcgtacggcgaagtgaagaag
ccggagacgatcaactaccgcaccttcaagcccgagcgtgacggcctgttctgcgccgcc
atctttggcccggtgaaggactacgagtgcctgtgcggcaagtacaagcgcatgaagcac
cgcggcgtggtgtgcgaaaagtgcggcacggaagtgacgctggccaaggtgcgccgcgag
cgcatgggccacatcgaactggcctcgccgaccgcgcacatctggttcctcaagtcgctg
ccctcgcgcatcggcctgatgctggacatgaccctgcgtgatatcgagcgcattctgtac
ttcgaagcgttcgtcgtgatcgatccgggtctgaccgcgctcgagcgcggccagctgctc
agcgaagaccagtacctggaagccgtggaagagcacggtgacgagttcgacgcccgcatg
ggtgccgaggccgtctacgagctgctcaagtccctggatcttccgggcgaagtcgtgcgc
ctgaaggaagaaatcgcctccaccaactccgagaccaagctcaagcgcctcaccaagcgc
gtgaagctgatcgaggcgttcctggagtcgggcaaccgtccggaatggatggtgctgacc
gtgctgccggtgctgccgccggacctgcgtccgctggtcccgctggacggtggccgtttc
gccacgtccgacctcaatgacctgtaccgccgcgtcatcaaccgcaacaaccgcctgcgt
cgcctgctcgaactcaatgcgcccgacatcatcgtgcgcaacgaaaagcgcatgctgcag
gaatcggtcgatgcgctgctcgacaacggccgccgcggccgtgccatcaccggcacgaac
aagcgcgcgctgaagtcgctggccgacatgatcaagggcaagcagggccgcttccgccag
aacctgctcggcaagcgagtggactactccggtcgttcggtgatcgtggtgggtccgacc
ctgcgtctgcaccagtgcggtctgccgaagaagatggcgctcgagctgttcaagcccttc
atcttcgccaagctgcaggctcgtggcgaagcgaccaccatcaaggccgccaagaagctc
gtcgagcgcgaagaaggccaggtgtgggacatcctcgaagaggtgatccgcgaacatccc
gtgatgctgaaccgtgcaccgacgctgcaccgtctcggcatccaggcgttcgagccgaag
ctgatcgaaggcaaagccatccagctgcacccgctcgtgtgtacggcgttcaacgccgac
ttcgacggtgaccagatggccgtgcacgtgccgctctcgatcgaggcgcagctcgaagcg
cgcgccctgatgatggcgaccaacaacatcctgtcgccggccaacggcgagccgatcatc
gtgccgacccaggacgtcgtccttggcttgtactacatgacccgcgagctggtgaacgcg
aagggcaacggcatggtgttctcgggcatcggcgaagttcgccgcgcctacgacaaccgc
gccgtgcaactgcacgccaaggtcaaggtccgcatcaaccaggtgcagatcgacgaagac
ggcaaccgcaccgaaaccacccagatcgtcgacacgaccgtgggtcgcgcgctgctgctc
gaaatcatgccggaaggcctgccgttcgcgctggccaacaccgagctgaccaagaagaac
atctcgcgcctgatcaaccagtgctaccgccgtctgggtctgaaggacaccgtgatcttc
ggcgatcagctgatgtacaccggtttccgcttcgcgacccgcgccggcatctccatcggc
atcgacgacatgatcatcccggatcagaagaagccgatcctggaagaagccgagaaggaa
gtggtcgagatccaggagcagtaccagtcgggtcttgtcaccgccggcgagcgctacaac
aaggtggtcgacatctggtcgcgcaccaacgaactcgtcgccaaggcgatgatcgacggt
atcggcaccgagaaggtggtcgatgccgaaggcaagacggtcaaccagaagtccatgaac
tcgctgtacatcatggccgactcgggcgctcgtggttcggtggcccagattcgtcagctg
gccggtatgcgcggcctgatggcccgcccggacggctcgatcatcgagacgcccatcaag
gcgaacttccgcgaaggcctgaacgttctgcagtacttcaactccacccacggtgcccgt
aagggtctggcggatacggcgttgaagacggcgaactccggttacctcacccgtcgtctc
gtggacgtggcgcaggacgtggtcatcaccttcggcgattgcggtacggacgaaggcgtt
accatgcagccgatcgtggaaggcggcgacgtggtcgagccgctgcgcgaccgcgtgctg
ggtcgtgtggccctggaagacgtctacggcccgggtgaagacaacgagccgatcgttacg
cgcgacacgctgctggacgaagccctggtcgagaagctcgacaaggccggcgtgcagtcc
atcaaggtccgttcgcccatcacctgtgctgccgaccatggcgtctgtgcactgtgctac
ggccgtgacctggcccgtggccacctggtgaacatgggtgaggccgtgggtgtcgtggcc
gctcagtccatcggtgagccgggtacccagctgaccatgcgtacgttccatatcggtggt
gcggcatcccgtgctgctgccgtggacaacgtgacggtgaagaccaccggcacgctgaag
ttcaacaacctcaagaccgtgcatcacaaccagggtcacctggtggccgtgtcgcgttcg
ggcgaattgagcgtcatcgacgccaacggccgcgagcgtgagcgctacaaggtgccgtac
ggcgcgaccatcgcggtcaaggacggcgatccggtcaaggccggccaggccgtggccaac
tgggatccgcatacccatccgatcgtgtcggaagtggccggtaccgtgcgcttcatcgac
ttcatcgatggcgtcaccgtgcagagccagaccgatgaactgaccggcctggagtcggcg
gtggtgaccgatccgaagcgccgtggtacggccgccaaggacctgcgcccgatcgtgcgt
ctggaagacgccaagggtcgcgagctgaagctgccgggcaccgacgtgccggcgcagtac
atgctcccggccggcgccatcgtgtcgatccagaacggtgcgcaggtgggcgtgggtgac
gtggttgcccgtatcccgcaggaaacctccaagacccgcgacatcacgggtggtctgccg
cgcgtggccgacctgttcgaagcccgcaagccgaaggaaccggcgattctcgccgagcgt
tcgggtgtgatcagcttcggcaaggacaccaagggcaagcagcgcctcatcatcaaggac
gtggacggcaacgagcacgaagagctgattcccaagtggcgtcaggtcatcgtgttcgaa
ggcgagcacgtggagaagggcgaaaccatcgtggacggcgagcccagcccgcacgacatc
ctgcgcctgctgggtgtcgagccgctggccgcctacctggtcaaggaaatccaggacgtc
taccgtctgcagggcgtgaagatcaacgacaagcacatcgaggcgatcattcgccagatg
ctgcgcaaggtggaaatcaccgatccgggtgagagccactacctgcgcggcgagcaggtc
gagcgcgtccgcatcaacggcgagaacgaccgcgccatcaagcgtggcgagcgtccggcg
gaattccagtcggtgctgctcggtatcaccaaggcctcgctggctacggaatccttcatc
tcggcggcatccttccaggaaaccacccgagtattgacggaagccgcagtccgcggtacg
cgtgacaccttgcgtggcctgaaggaaaatgttattgtcggccgtcttattccggcaggt
acgggtctggcgtatcacgcatcgcgtcatcgccagggcggtctgaccgcctcggagctt
gaaactctctctggctccgcttcgtcggcttccttcgcagaagccaccaccggtagcgac
attggtgtggagtaa
DBGET
integrated database retrieval system
