Dermabacter jinjuensis: COP05_01675
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Entry
COP05_01675 CDS
T06191
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
djj
Dermabacter jinjuensis
Pathway
djj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
djj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
COP05_01675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
djj03400
]
COP05_01675
Enzymes [BR:
djj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
COP05_01675
DNA repair and recombination proteins [BR:
djj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
COP05_01675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
ATH95943
LinkDB
All DBs
Position
complement(386857..387696)
Genome browser
AA seq
279 aa
AA seq
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MRIATWNINSLRARMPRLLEVIDTRNIDVIALQEIKAKPEQLDLSGLTERGFEVAAHGFN
QWNGVAIASRVGLREVRREIPSIPAWGEGDDGVVEARAIGAVVGDASSDCAPLELWSLYV
PNGRELDNPHYPYKLAWLEAVRNYAASRLDVGGPGEAPGEDSATLFAGDFNVAPTDADVW
DMTVFEGKTHVSGPERDAIAALENAGYADLTRDWLDAPGTYTYWDYKGLKFAKKQGMRID
FMFGSPAVRAATTGAMIDLAERAQKSTSDHAPVIVDVEL
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattgccacctggaacatcaattcccttcgcgcacggatgccccgccttctcgag
gtgatcgatacccgcaatatcgatgtcattgcacttcaggagatcaaagccaaacccgag
cagctcgacctcagcggtctcaccgagcgcggattcgaagtcgccgcccacggctttaac
cagtggaacggcgtcgcgatcgcctcgcgcgtgggccttcgcgaggtgcgccgcgagatc
ccctcgattcccgcctggggcgaaggggatgatggggtcgtggaggcccgcgccattggg
gccgtcgtgggagacgcctcgagcgactgcgcgccccttgagctgtggagtctttacgtc
ccgaacgggcgagaactcgacaacccgcactacccgtacaaactcgcgtggctcgaggcc
gtgcgcaattacgcggcctcgcgcctcgatgtcggcgggccgggcgaagcgcccggcgaa
gactcggcgaccctcttcgcgggcgacttcaacgtcgctcccaccgacgccgacgtatgg
gacatgacggtcttcgaggggaaaacccacgtgagcgggcccgagcgtgacgccatcgcg
gcgctcgagaacgcgggctacgccgacctcacacgcgactggctcgatgcccccgggacc
tacacgtactgggactacaagggcctcaagttcgcgaagaagcagggtatgcgcattgac
ttcatgtttggctcgcccgcagtgcgcgcggcaacaaccggggcgatgatcgaccttgcc
gaacgggcgcagaaatccacgagcgatcacgcacccgtgatcgtcgacgttgagctctag
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