Dermabacter jinjuensis: COP05_09550
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Entry
COP05_09550 CDS
T06191
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
djj
Dermabacter jinjuensis
Pathway
djj03030
DNA replication
djj03430
Mismatch repair
djj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
djj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
COP05_09550
03430 Mismatch repair
COP05_09550
03440 Homologous recombination
COP05_09550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
djj03032
]
COP05_09550
03400 DNA repair and recombination proteins [BR:
djj03400
]
COP05_09550
Enzymes [BR:
djj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
COP05_09550
DNA replication proteins [BR:
djj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
COP05_09550
DNA repair and recombination proteins [BR:
djj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
COP05_09550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
AAA_30
RuvB_N
Rad17
AAA_14
AAA_16
AAA_19
DEAD
AAA_18
ResIII
Mg_chelatase
AAA_28
zf-CXXC
CIS_TMP
Motif
Other DBs
NCBI-ProteinID:
ATH97298
LinkDB
All DBs
Position
complement(2082824..2085802)
Genome browser
AA seq
992 aa
AA seq
DB search
MATALYRRYRPESFAEVIGQDHVTEPIRRALKSGRIGHAYLFSGPRGCGKTTSARILARC
LNCAEGPTDTPCGTCDSCRNLARDGAGSLDVVEIDAASHGGVDDARDLRERAAFAPVRDR
FKVFIIDEAHMVTSAGFNALLKLVEEPPEHVKFVFATTEPDKVIGTIRSRTHHYPFRLIP
PQVLLPYLEQICAQEGVAVEDGVLSLAVRAGGGSARDTLSVLDQLIAGSDERGVELEVAT
NLLGFTDVELLNRAVDAIAAHDAATLFGVLDEVIGSGHEPRRFVEDLLERFRDLIVLVAA
PERARELLPDVPSDQVQRLSAQAEDFEPRTLTHLAQVTSEALNSMVGATSPRLHLELLAA
RLLLSPATGTGEGAMGARPGAVGGVAGASSGGANVGGAAQSDASRQTLSPRQRAVQIARE
QAAAAAGRDNDQASRAPQAEESSPHAHRDPAREEQKAVQADQPRTQPEAQEESARVPASP
EAEPVRNAQSSRPTPEQPQSQPRRPAPSNSDDSWGDLVSQQPSDSPKPNPATEQRAHSAT
KGANPQATPANSGASASDVEGHWSALMDTLQTLKRASWALIAQNAGIQSFDGSTLVLSFR
SQGLVNAFYRGQHAPHMAEAVRRIMRIDVTVEAASGDVPPGGGSGGSPSNGSPANGNRSR
EGGSPRAAAPTERWGDAVAPAEHSAPSPHAPGQNAANARATRDAEASPGGQPPVAVAAPR
EPDADVPPFFDEEPPGDEDAPPEDYTPQRTSEPEPEPRAQFDEATPARDTASMPRGVTEP
VRIPAQPGEREPRTHGQKALKEAMASAFGQGFEPAATLVDEPEANVPAGHEKDPAIRRAQ
AEVDAEQADAWSGTATATSTDGDSWGLSTQPGVQPDPAPARQELTRGPGLGPAGAPRLTG
AALARQALHEAQANRHGNSEHAGYGLNGRSQHSPKAQESHASAEGQNYDDPFQGASLDDE
DASSTGSQRRPGRDIVEEFLGGEVLEVIDEQP
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
gtggctacagctctttaccgtcgttatcgccccgagtccttcgccgaagtgatcggccag
gaccacgtcaccgagccgatccggcgagcgttgaagtcgggccgaatcggccacgcctat
cttttttcgggcccgcgcggctgcggcaagaccacgtcggcacgcatcctcgcgcggtgc
ctgaactgcgccgaggggcccacggatacgccctgcggcacgtgcgattcatgccgcaat
ctcgcacgcgacggggcgggcagcctcgacgtcgtcgagatcgacgcggcgagccacggc
ggcgtggatgatgcccgtgacctgcgtgaacgtgcagcttttgctccggtccgcgaccgc
ttcaaggtcttcatcatcgacgaggcccacatggtcacctcggccggcttcaacgcgctg
ctcaagctcgttgaggagccgcccgagcacgtcaagtttgtgttcgcgacgaccgagccc
gacaaggtgatcggcacgattcgttcgcgcacccaccactatccgttccgcctcatcccg
ccgcaggtgctgcttccctacctcgagcagatttgcgcccaggagggcgtcgctgttgag
gatggggtcctctcgctcgccgtgcgtgcgggcggcggctcggcccgtgacacgttgagc
gtgctcgaccagctgatcgccggctctgacgaacgcggtgtcgagcttgaggttgcgacg
aacctgctcggcttcaccgacgttgaactgcttaatcgcgcggttgatgccatcgcggcg
cacgacgccgcgaccctgttcggcgttctcgacgaggtgatcggctcgggccacgagcct
aggcgctttgtcgaggacctgctcgagcgcttccgtgatctcatcgttctcgtggctgcc
cccgagcgcgcacgcgagctgcttccggacgttcctagcgaccaggtccaacgcctgagt
gcccaggccgaggatttcgagcctcgcacgcttacgcatttggcacaggtgacgagcgag
gccctcaattccatggtgggcgcgacgtcgccacgcttacatctcgaattgctcgccgcg
aggctccttctcagcccggcgacgggtacgggggagggcgcaatgggggcacgtccgggc
gcggtgggcggcgtcgcgggtgcttcttccggtggggcgaacgtgggcggggctgcgcag
tccgacgcctcccgccaaaccctgtctccacgtcagcgcgccgtgcaaattgcacgtgaa
caggcagcggcggccgcgggccgcgacaacgatcaggcctcgcgagcgccgcaggccgag
gaatcgtcgccgcacgcgcaccgagatcccgcgcgagaagagcagaaagcggtgcaggca
gatcagcctcggacgcagccagaggctcaagaagagtcggcgcgcgtgccagcctcgcct
gaagctgaacccgtgagaaacgctcagtcctctcggccgacgccggagcaacctcaatcg
cagccacggcgaccggcgccgagcaacagcgatgattcatggggtgaccttgtgtcgcag
caaccgtcggactccccgaagccgaacccggccaccgagcaacgggcccattctgcgacg
aagggggcgaacccgcaggccacaccggcgaattcgggcgcgagtgcgagcgatgttgag
gggcactggtcggcgctcatggatacgctgcagacgctcaagcgcgcatcgtgggcgctc
atcgctcaaaatgcaggcattcagtcgtttgacggctcgaccctcgtgttgagtttccgc
agccaggggctcgtcaatgctttctatcgcggccagcacgcgccgcatatggccgaggcc
gtgcggcgcatcatgcgcatcgacgtgacggtcgaggctgcctctggcgatgtgccgccg
gggggagggagcggcggttctccctccaatggttcgcccgcgaacggcaatcgatcacgc
gaaggcggatcccccagggccgccgcgcccactgaacggtggggcgatgccgttgcgcca
gccgagcattcggcgccttcaccgcacgcgcccgggcagaacgcggcgaatgcacgcgca
acgcgcgacgcggaggcgtctccaggaggccagcctcccgtggcagttgccgcccctcgc
gagccggacgcggacgtgccgccgttcttcgacgaggagcctcccggtgacgaggatgcc
ccgcctgaggactacacaccgcagcgcacctccgagccggagcccgaacctcgggcgcag
tttgatgaagcaacgcccgcgcgcgacactgcttcgatgccgcgcggggtcacggagccg
gtgcgcatcccggcacaaccaggcgagagggagccacgcacccacggccagaaggctctc
aaggaggcgatggcaagcgcgttcggtcagggctttgaacctgcggcgactctcgtagac
gaacccgaggcgaacgtcccggcggggcacgaaaaggatccggcaatccggcgggctcag
gccgaggtggatgcggagcaggccgatgcatggtcgggaacagcaaccgctacttcgacg
gatggggacagctggggactaagcacacaaccaggcgtacaacccgatccggctcccgcg
cgacaggagctcacgcggggcccgggtttaggtcccgccggcgcgccgcgtctgacgggt
gctgcgctcgcgcggcaggccctccacgaagcgcaggctaatcgacacggcaacagtgaa
catgctggctatgggctcaatgggcgcagccagcactcgcccaaggctcaagaatcgcac
gcgagcgccgagggtcagaactacgatgaccccttccagggggcttcgctcgatgacgag
gacgcgtcgtcgaccggctcgcagcgccgccccggtcgcgacattgttgaggaatttctc
ggcggcgaggtgcttgaggttatcgacgagcagccctga
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