KEGG   Dokdonella koreensis: I596_1831Help
Entry
I596_1831         CDS       T04377                                 

Definition
(GenBank) D-alanyl-D-alanine carboxypeptidase
  KO
K07259  serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
Organism
dko  Dokdonella koreensis
Pathway
dko00550  Peptidoglycan biosynthesis
Brite
KEGG Orthology (KO) [BR:dko00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    I596_1831
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:dko01002]
    I596_1831
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:dko01011]
    I596_1831
Enzymes [BR:dko01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     I596_1831
   3.4.21  Serine endopeptidases
    3.4.21.-  
     I596_1831
Peptidases and inhibitors [BR:dko01002]
 Serine peptidases
  Family S13: D-Ala-D-Ala peptidase C family
   I596_1831
Peptidoglycan biosynthesis and degradation proteins [BR:dko01011]
 Peptidoglycan biosynthesis and degradation
  DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
   I596_1831
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Peptidase_S13 Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID: ANB17854
UniProt: A0A160DUD2
LinkDB All DBs
Position
2104674..2106206
Genome map
AA seq 510 aa AA seqDB search
MKRPACWLAALLLGTAGGTVQAAGAAATRAQIDAILAEPRFAAASWGVQAVSIDSGRTVY
AHQAERLLVPASTAKLYTAALALATFGGDYRIPTTLFATAAPARDGELHGDLVLYGYGDP
ALGADADVSWADRLAIALRRRGVTRVHGDLIGDATRFAAPLFGAGWEAADLQSWFGMPAA
ALSVDENLVTVRIRPAPQVGAMAGLRFEPPGSAPDLANRLLTVARGRPTDVGLFRAPGQA
TLQAFGSIAADAGEQRYRLALVDPALTAAGQLRDALARQGVTLEGRLRSVYWPERTVAMA
ADAPQRIAEVHSPPLADLVRRGLKVSQNLYLQNLFLLVGAAEADKVRALQPDSLPFRSTD
QRAADALRRYLSGLGITPQQASIEDGAGLSRRNLTSAAALATLLQRWGDTPDGAAFRLAL
PQAGVDGSLAGRLRDTPAQGRVHAKTGAMNGIRGLAGYLTTAAGERLAFAILLNNYQPPG
DAATARPSGEIDRIVLALAALDERSSAARP
NT seq 1533 nt NT seq  +upstreamnt  +downstreamnt
ttgaaacggccggcgtgctggctggcggcgctgctgctgggcacggccggcggcaccgtc
caggcggccggtgccgccgcgacccgcgcgcagatcgatgcgatcctcgccgagccgcgc
ttcgccgcggcgagctggggcgtccaggcggtgtcgatcgacagcggccgcacggtctat
gcccaccaggccgagcgcctgctggtaccggcctcgacggccaagctctacaccgcggcg
ctggcgctggcgacattcggcggcgactaccggataccgacgacgctgttcgcgacggcg
gcaccggctcgcgacggtgaactgcacggcgacctggtcctctacggctacggcgatccg
gcgctcggcgccgatgcggacgtgtcctgggccgaccggctggcgatcgcgctgcgccgg
cgcggcgttacccgcgtgcacggcgacctgatcggcgatgccacgcgcttcgcggcgccg
ctgttcggcgccggctgggaagcggcggacctgcagagctggttcggcatgcccgcggcg
gcgctcagcgtggacgagaacctggtgacggtccgcatccggccggcgccgcaggtcggg
gcgatggccggcctgcgcttcgagccgcccggctcggcgccggacctggccaatcgcctg
ctgacggtcgcccgcgggcggcccaccgatgtcggcctgttccgcgcaccgggacaggcc
acgctgcaggcgttcggcagcatcgccgccgatgcgggcgagcagcgctaccgcctggcg
ctggtggacccggcgctgacggcggccggccagctgcgcgacgcgctggcccggcagggc
gtgacgctggaagggcggttgcgcagcgtctactggccggagcgcaccgtggcgatggcc
gccgatgcgccgcaacgcatcgccgaggtgcactcgccgccgctggccgacctggtacgg
cgcgggctcaaggtgtcgcagaacctgtacctgcagaatctgttcctgctggtcggcgcg
gcggaggcggacaaggtgcgcgcgctgcagcccgactccctgccgttccgcagcaccgat
cagcgggcggccgatgcgctgcgccgttatttgtcgggcctcggcatcacaccgcagcag
gcttcgatcgaggacggggccggcctgtcgcggcgcaacctgacctcggccgcggcgctg
gccaccctgctgcaacgctggggcgacacgcccgacggcgcggccttccggttggcgctg
ccgcaggcgggcgtcgacggctcgctcgccggccgcctgcgcgatacgcccgcgcagggc
cgcgtccatgccaagaccggcgcgatgaacggcattcgcggcctggccggctacctgacc
accgccgccggcgaacggctggcgttcgcgatcctgctcaacaactaccagccgccgggg
gacgcggccacggcacggccgagcggcgagatcgaccgcatcgtgctggcgctggccgcg
ctcgacgagcgcagttccgcggcaaggccctag

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