Desulfofundulus kuznetsovii: Desku_1763
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Entry
Desku_1763 CDS
T01499
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
dku
Desulfofundulus kuznetsovii
Pathway
dku02020
Two-component system
dku02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dku00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Desku_1763
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Desku_1763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dku03021
]
Desku_1763
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
dku02035
]
Desku_1763
Transcription machinery [BR:
dku03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Desku_1763
Bacterial motility proteins [BR:
dku02035
]
Flagellar system
Flagellar assembly proteins
Stator
Desku_1763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
HTH_23
MarR_2
HTH_31
UPF0122
GerE
HTH_Tnp_4
Sigma70_ECF
Sigma70_r3
PgaD
MerR-DNA-bind
Motif
Other DBs
NCBI-ProteinID:
AEG15331
LinkDB
All DBs
Position
complement(1768561..1769313)
Genome browser
AA seq
250 aa
AA seq
DB search
MDNKEKLWQEYKRTKSPEIRHQLILSYLWLVKYLAGRLAVKLPACLSQEDLESCGIFGLI
EAIDKFDPDMGCNFEAYASTRVRGAMLDEVRRANWMPRTLWYKLQRLRAAREKLENIHQE
KVSMEAVAQEMGISQAEVHYLDSQLYRLFTLSLDEMVAAGNGEPVRLGDLLPDETSPDPL
DRITEEENKELLARAVASLPEKDQLVLALYYQEGLTLKEIGAVLEVSESRVCQLHSRAIN
RLRKKLAELS
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
gtggataataaggagaagctctggcaggagtacaagcgaacgaagagcccggaaatccgc
caccagctcatcctgtcttacctctggctggtcaagtacctggccggccggctggctgtc
aagctgcctgcttgcttgagccaggaggacctggaaagctgcgggatttttggtttaata
gaagcaattgacaaattcgaccccgacatggggtgcaattttgaagcttacgccagtacc
cgggtgcggggagccatgctggacgaggtgcgccgggcaaactggatgccccgcaccctg
tggtacaaattacagcggctcagggctgcccgggagaagctggaaaacatacaccaggaa
aaggtatccatggaggcagtggcgcaggaaatgggtatttcccaggccgaagtgcactac
ctggacagccagctgtaccggctgttcaccctttccctggatgaaatggtggccgcgggc
aacggtgagcccgtccggctgggggacctgctgcccgacgaaaccagccccgaccccctg
gaccgcatcaccgaggaggaaaacaaggaacttttggcccgcgccgtggccagcctgccg
gaaaaggaccagctggtgctggccctgtactaccaggaggggcttactttaaaggaaatc
ggagccgtgctggaagtttccgaatcaagggtctgccagctgcacagccgggccatcaac
cgcctgcgcaagaagctggcggaactgagctag
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