Delphinapterus leucas (beluga whale): 111163471
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Entry
111163471 CDS
T05885
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
dle
Delphinapterus leucas (beluga whale)
Pathway
dle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111163471 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dle03019
]
111163471 (PARN)
Enzymes [BR:
dle01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
111163471 (PARN)
Messenger RNA biogenesis [BR:
dle03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111163471 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_1
NCBP3
T6PP_C
Motif
Other DBs
NCBI-GeneID:
111163471
NCBI-ProteinID:
XP_022407882
UniProt:
A0A2Y9LLF6
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRLQSNGAGALSYTSPNTSKCPVTIPEDQKKF
IDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIV
ISKVDEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQF
YCPLPSDLNEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNPPKV
ESAEGFPSYDTASEQLHEAGYDAYITGLCFISMANYLGSFLSPPKIHVSARSKLIEPFFN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWINDTS
AFVSLSQPEQVPIAVNTSRYAESYRIQTYAEYVGTKHEEKQIKRKWTEDSWKEVERKRLN
TQCISYALQNHCYHANSLTATSTVGKRNLSPSQAEGVLEARVSGEISDTELEQTDPCAES
LSEGRKKAKKFKRMKKDLSPTGSISDSSAKLFEVPDTW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggagataatcaggagcaattttaagagtaatctccacaaagtgtaccaagccatagag
gaggcggacttcttcgccatcgatggggagttttcaggaatcagcgatggaccctcggtc
accgcattaacaaatggttttgacactccggaagaaaggtatcagaagcttaaaaagcat
tccatggactttttgctgtttcagtttggcctttgcacttttaagtatgactacacagat
tcaaagtatataacgaagtcttttaacttctatgttttcccgaagcccttcaatagatct
tcaccagatgtcaaatttgtttgtcagagctcaagcattgactttctagcaagccaagga
tttgattttaataaagtttttcgcaacggaattccatacttaaaccaggaagaagaaaga
cagttaagagagcagtatgatgaaaaacgtttacagtccaacggcgcaggtgctttgtcg
tacacgtctcctaacacctcaaaatgtcccgtgacgattcctgaggatcagaagaagttt
attgaccaagtggtagagaaaatagaagatttattacaaagtgaagaaaacaagaacttg
gatttagagccatgtactgggttccaaagaaaactaatttatcagactttgagctggaag
tatcccaaaggcattcatgttgagactttagaaactgaaaagaaagagcgctatattgtt
atcagcaaagtagatgaagaagaacgtaaaagaagagagcagcagaaacacgctaaggaa
caggaagaactgaatgatgctgtggggttttctagagtcattcatgccattgctaattcg
gggaaacttgtcattggacacaatatgctcttggatgtcatgcacacagttcatcagttc
tactgccctctgccctcggacttaaatgagtttaaggagatgacaacatgtgtcttcccc
agactcttggatacaaaattgatggccagcacacaaccttttaaggatatcattaacaac
acatcccttgcggaattggaaaagcggttaaaagagacacctttcaaccctcctaaagtt
gaaagtgcagaaggttttccaagttatgacacagcttctgaacagctccacgaggcaggc
tatgatgcttatatcacaggactatgtttcatctccatggcaaactacctaggttctttt
cttagtcctccaaagattcatgtgtctgccagatcaaaactcatcgaacctttttttaac
aagctatttctcatgagagtcatggatatcccctatctaaacttggaaggaccagacttg
cagcctaaacgtgatcacgtcctccatgtgacattccccaaagaatggaaaaccagtgac
ctttaccagcttttcagtgcctttggtaacattcagatatcctggatcaatgacacatca
gcatttgtttctctcagccaacctgaacaagtaccaattgctgtcaataccagcagatat
gcagagagctatcggatccagacctatgctgaatatgtggggacaaagcatgaggagaag
cagatcaagagaaagtggacagaagatagttggaaggaggttgagagaaagcggttaaac
acgcagtgcatctcctatgctttgcagaatcactgttaccacgccaatagtctcacagcc
accagcacagtaggaaagagaaatctgagtcccagtcaagcagaaggtgtcctggaggcc
agagtatcaggggagatttctgacactgagcttgagcagacagatccctgtgcagaatcc
ctctcagagggaaggaaaaaggccaagaaatttaaaaggatgaagaaggacctttctccg
acaggaagcatctcggacagctcagccaagctctttgaggtccctgacacgtggtaa
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