Dehalococcoides mccartyi DCMB5: dcmb_1344
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Entry
dcmb_1344 CDS
T02476
Symbol
appF
Name
(GenBank) 5-6 amino acyl oligopeptide transporter AppF
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
dmd
Dehalococcoides mccartyi DCMB5
Pathway
dmd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dmd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
dcmb_1344 (appF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmd02000
]
dcmb_1344 (appF)
Transporters [BR:
dmd02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
dcmb_1344 (appF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_16
oligo_HPY
AAA_22
AAA_21
nSTAND3
AAA_29
TsaE
AAA_23
AAA
AAA_15
SMC_N
CbiA
NACHT
MobB
NB-ARC
AAA_30
AAA_5
RsgA_GTPase
AAA_33
Zeta_toxin
nSTAND1
AAA_18
SRP54
PRK
Mg_chelatase
PhoH
PduV-EutP
AA_synth
Motif
Other DBs
NCBI-ProteinID:
AGG06934
UniProt:
A0AA85ZZG0
LinkDB
All DBs
Position
complement(1263699..1264634)
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AA seq
311 aa
AA seq
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MLKAENLSVHFVVRHNPLVRLKHPDHTIRAVSDVSIELKNGEILGLVGESGSGKTTLARA
LAGLVRPSGGQVLYRGSDLQKMDAPEFKKYRREVQLILQDSDSTLDPRMRLVELLEEPLK
INRHLDKAERQDLVSAIMEKTFIPPSLAGRYPTELSGGQRQRVSLARTLLVRPKIIIADE
PLSGLDTILRYQLLKLMLELKEEYGLSYLLISHDLQMISSVCNRVAVMYRGKLVEVMESG
NMSSAVHPYTKMLLAGLALELEEGHDLHHHAEDGQGCGFAGRCPVHLPICHQETPSLKGV
SENHLCACHLA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaaagccgaaaatctgtcagtccattttgtagtcaggcataacccgctggtacgt
ttgaagcacccagaccacaccatcagggctgtttccgacgtgagtattgaactgaaaaac
ggagagatactgggtctggtaggtgaaagcggttcgggcaagaccactctggccagagcc
ttggcagggctagttcgcccttctggcgggcaggtattataccgggggagtgacctgcaa
aaaatggatgcccctgagttcaaaaaataccgccgcgaagtccagctaatactgcaggac
tcggattcaactctggacccccgcatgaggcttgtagagcttctggaagagcctctaaag
ataaaccggcacttagataaggctgaaagacaagatttggtttcagccattatggagaaa
acttttattcctccttcgcttgcgggtcgctaccccacggaactgtccggcgggcagcgt
cagcgggtgtcacttgccagaaccctgctggtaaggcctaaaataataatcgctgatgaa
cctttgagcgggctggatactatccttcgttaccagttgctcaagcttatgctggagctt
aaagaggaatacggtttaagctacctgcttatttcccatgatttacagatgattagttca
gtttgcaaccgtgtggcagtcatgtaccggggcaagctggttgaggtaatggaaagcgga
aatatgtcttcggctgttcacccctatacgaaaatgctgctggcagggttggcactggag
cttgaagaaggtcatgacctgcatcatcatgccgaagacgggcaaggctgcggttttgcc
gggcgttgcccggtgcatttaccgatttgccaccaggaaactccatccctgaaaggggtt
tccgaaaatcatctctgcgcctgtcatttagcctga
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