Drosophila melanogaster (fruit fly): Dmel_CG1101
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Entry
Dmel_CG1101 CDS
T00030
Symbol
Ref1
Name
(RefSeq) RNA and export factor binding protein 1
KO
K12881
THO complex subunit 4
Organism
dme
Drosophila melanogaster (fruit fly)
Pathway
dme03013
Nucleocytoplasmic transport
dme03015
mRNA surveillance pathway
dme03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dme00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Dmel_CG1101 (Ref1)
09122 Translation
03013 Nucleocytoplasmic transport
Dmel_CG1101 (Ref1)
03015 mRNA surveillance pathway
Dmel_CG1101 (Ref1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dme03019
]
Dmel_CG1101 (Ref1)
03041 Spliceosome [BR:
dme03041
]
Dmel_CG1101 (Ref1)
Messenger RNA biogenesis [BR:
dme03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
Dmel_CG1101 (Ref1)
TREX complex
Dmel_CG1101 (Ref1)
Spliceosome [BR:
dme03041
]
Complex C
Other components
EJC/TREX
Dmel_CG1101 (Ref1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
Dmel_CG1101 (Ref1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
44029
NCBI-ProteinID:
NP_651968
FlyBase:
FBgn0010774
UniProt:
Q9V3E7
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All DBs
Position
3R
Genome browser
AA seq
266 aa
AA seq
DB search
MVDKIEMSLDDIIKSTRSQKKPQAARGGPGGARKTGGQQRFAGGARRGGANAGGSPRKPG
SVLKGPRGGVAAGAVQKAKFPRGDVNSAWKHDMYDGPKRGAVGGGSGPTRLIVGNLDYGV
SNTDIKELFNDFGPIKKAAVHYDRSGRSLGTADVIFERRADALKAIKQYHGVPLDGRPMT
IQLAVSDVAVLTRPVAATDVKRRVGGTAPTSFKRGGGQAGGTARRGFKRPVGGKPAAGGQ
RRERKAPPTAEELDAELDSYINDMKI
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggtggacaaaattgaaatgagcctcgacgacatcattaagtccacacgctcgcaaaaa
aagccgcaagccgcccgcggcggaccaggtggcgcccgaaaaacgggcggacagcagcgt
tttgctggtggagcccgccgcggcggagccaatgccggcggctcgcccaggaagccagga
agcgtgctcaagggcccgcgaggaggagtggccgccggagccgttcagaaggccaagttc
ccacggggcgatgtgaacagcgcttggaagcacgatatgtacgacggaccgaagaggggt
gccgtcggtggaggatctggacccacccgcctcatcgtcggtaacctggactacggcgta
tccaacacggacatcaaggagctcttcaacgactttggtccgataaagaaggcggcagtg
cactacgatcgctccggtcgctcgttgggcaccgctgacgtgattttcgaacgtcgcgcc
gacgccttgaaggccattaaacagtaccatggcgtacctttggacggacgccctatgacc
attcagctggccgtctcagacgtggccgtgttgacccgtcccgtagccgccaccgatgtc
aagcgtcgcgtgggtggtactgcaccaacttcattcaagcgtggtggtggccaagctggt
ggcacggcgcgtcgcggcttcaaacgtccggtcggtggcaagccggcggcaggcggccag
cgacgggagcgcaaggccccgcccactgctgaggagctggacgccgaactggactcatac
atcaacgacatgaagatctaa
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integrated database retrieval system
