KEGG   Drosophila melanogaster (fruit fly): Dmel_CG4849
Entry
Dmel_CG4849       CDS       T00030                                 
Symbol
CG4849
Name
(RefSeq) uncharacterized protein
  KO
K12852  116 kDa U5 small nuclear ribonucleoprotein component
Organism
dme  Drosophila melanogaster (fruit fly)
Pathway
dme03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dme00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Dmel_CG4849 (CG4849)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dme03041]
    Dmel_CG4849 (CG4849)
Spliceosome [BR:dme03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    Dmel_CG4849 (CG4849)
 Complex C
   U5 SnRNP specific factors
    Dmel_CG4849 (CG4849)
SSDB
Motif
Pfam: GTP_EFTU EFTUD2 EFG_C EFG_IV GTP_EFTU_D2 EFG_III MMR_HSR1 Roc Dynamin_N Septin Ras TniB
Other DBs
NCBI-GeneID: 43358
NCBI-ProteinID: NP_651605
FlyBase: FBgn0039566
UniProt: Q9VAX8
LinkDB
Position
3R
AA seq 975 aa
MDSDLYDEFGNYIGPDLDSDEEDEQSIYGQPDVQDDPEDAMDEDEVEPQEDEDKEVTAVV
LHEDKRYYPSAVEVYGPDVETIVQEEDAQPLDKPLIEPVKKLKFQIKEQDMQETTYDMEF
MADLMDTPPLIRNVALVGHLHHGKTTFVDCLIRQTHPQFETMEERQLRYTDTLFTEQERG
CSIKATPVTLVLQDVKQKSYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDAAEGVMLN
TERLLKHAVQERQAITVCINKIDRLILELKLPPQDAYFKLKHIVEEVNGLLSTYGAPDDN
LLVSPILGNVCFASSLYGFCFTLKSFAKLYADTYEGVAYLDFAKRLWGDMYFNSKTRKFS
KKQPHNSAQRSFVEFILEPMYKLIAQVVGDVDTTLSDTLAELNVRVSKEEMKSNIRPLLR
LVCNRFMGDCSGFVDMCVEHIKSPLENAKRKVDHIYTGPKEGDIYRDMISCNQYGTLMVH
SSKMYPNDDCTFFQVLARIVSGTLHAGQEVRVLGENYTLQDEEDSRILQVGRLWVFESRY
KVELNRVPAGNWVLIEGIDQCIVKTSTIVDINVPEDLYIFRPLKFNTQSIIKIAVEPVNP
SELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVAD
PVVAFCETVVETSSLKCFAETPNKKNKITMISEPLEKGLAEDIENGTVCINWNKKRIGEF
FQVNYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKNLLTAVKDSIVQGFQWGTREG
PLCEEPIRNVKFKILDGVIANEALHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQ
APADCVSAVYTVLARRRGHVTQDAPVSGSPIYTIKAFIPAIDSFGFETDLRTHTQGQAFC
LSVFHHWQIVPGDPLDKSIIIRPLEPQQASHLAREFMIKTRRRKGLSEDVSINKFFDDPM
LLELARQDVLINYPL
NT seq 2928 nt   +upstreamnt  +downstreamnt
atggattccgatttgtacgatgagtttggcaactatattggccccgatttagacagcgac
gaggaagatgagcaaagtatttatgggcaacccgatgtgcaggatgacccagaggacgcc
atggacgaggacgaggtggagccacaggaggacgaggacaaggaggtgaccgccgtggtt
ttgcacgaggacaaacgctactatccgtcagcagttgaggtctacggcccggatgtggag
accattgtccaggaggaggacgcccagccgctggacaagccgcttatagagccagtgaag
aagctcaagttccagatcaaggagcaagacatgcaggagaccacctacgacatggagttc
atggccgatctcatggacactccgccgcttattcgcaacgtggctttggttggccacctg
caccacggcaagaccacctttgtcgactgcctcatccggcagacgcatccgcaatttgag
accatggaggagcgccagttgcgctacacggacaccctgttcacggaacaggaacgcggc
tgcagcatcaaggccacgccggtcacacttgtcctgcaggatgtcaaacagaagagctac
ttgctgaacatcttcgacaccccggggcatgtcaacttctcggacgaggccaccgccgcc
atgcgaatgagcgatggtgtcgtgctgttcatcgatgccgccgagggcgtcatgctcaac
acggagcgactgctcaagcacgcggtgcaagagcgccaggctatcaccgtttgcataaac
aagattgatcgcctcatcctggagctgaaattgccgccccaggacgcctactttaagttg
aaacacattgtggaggaagtcaatgggctgctgagcacctatggcgctccagatgacaat
ctcttagtttcgcctattttgggcaacgtgtgcttcgccagctcgttgtacggattttgt
ttcactctgaaatcctttgccaagctgtatgcagacacctatgagggagtggcttacctg
gactttgccaagcggctctggggtgacatgtacttcaacagtaaaacgcgcaagttctcg
aagaagcagccgcacaattcggcacagcgcagctttgtggagttcattttggagcccatg
tacaagctgatagcccaggtggttggcgatgtggacaccactttgtcggacactctggcc
gagctgaatgtgcgcgtctccaaggaggagatgaagtccaatataagaccactgctgcgt
ctcgtctgtaaccgcttcatgggcgactgcagcggttttgtggatatgtgcgtggagcac
attaaatcccctttggaaaatgccaagcgaaaggtggaccatatatacactggacccaaa
gagggtgacatttaccgggatatgatatcatgcaaccaatacggcactctgatggtgcac
agttccaagatgtatcccaacgacgactgtaccttcttccaagtgctggcgaggattgtc
tctggtactctacacgctggccaggaggtgcgtgtcctgggagagaactacaccttgcag
gatgaggaggactctcgcattctgcaagtcggtcgtctgtgggtatttgagtctcgttac
aaggtggagttaaatcgtgtacccgccggaaattgggtgctcatcgaaggcatcgatcag
tgtatcgttaagacctccacaattgtggatattaatgttccagaagacctctacatattc
cgaccactgaagttcaacacccagagcattatcaagattgctgtggagccagtgaatcca
tccgagcttcccaagatgttggatggcctccgcaaggtgaataaatcctatccacttctc
tccactcgagttgaagaatccggcgagcatgttattctgggcactggcgagctgtacttg
gattgtgtcatgcacgatctgcggaagatgtactccgagatcgacatcaaagtggcggat
cccgtcgtggctttttgcgaaacagttgtggaaacgagttccctgaaatgtttcgccgaa
acgccgaataagaaaaacaaaataaccatgatctcggagccactggagaagggactggcc
gaggacattgagaacggaaccgtctgcataaactggaacaaaaagcgcatcggcgagttc
ttccaagtcaactacgattgggatctgcttgcggcgcgttccatttgggccttcggtccc
gactccacgggtccaaatatcctggtcgacgacaccctgccctcggaagtggacaagaac
ctgctgaccgcggttaaggattcgattgtgcagggcttccaatggggaacgcgagaaggg
ccgctgtgcgaggagccaatccgtaatgtcaagtttaagattctcgatggcgtcatcgcc
aacgaggcgttgcatcgaggcggtggacagatcattccaacagcccgtcgtgtggcatac
tcggcgtttttgatggccaccccacgtttaatggaaccatatctatttgtggaggttcag
gcgccggcagattgtgtatccgctgtctatactgtgctggccaggcgcagaggccacgta
acgcaggatgctcccgtatcgggttctcccatatatacgatcaaagccttcatacccgcc
attgattcatttggatttgagacggatctccgcacgcacacccagggccaggccttctgc
ctttcggtgttccatcactggcagatagtgcctggcgatcccctggacaagagcatcata
atccggccactggagccgcagcaagcatcccatttggccagagagtttatgatcaagacg
cgtcgcaggaagggtctgtccgaggacgtgtccatcaacaaattcttcgacgatcctatg
ttgctggagttggcacgccaggatgtgctgatcaactacccgctttag

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