Desulfosporosinus meridiei: Desmer_0563
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Entry
Desmer_0563 CDS
T02207
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
dmi
Desulfosporosinus meridiei
Pathway
dmi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dmi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Desmer_0563
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dmi02000
]
Desmer_0563
Transporters [BR:
dmi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Desmer_0563
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_25
SMC_N
Motif
Other DBs
NCBI-ProteinID:
AFQ42603
UniProt:
J7IU04
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All DBs
Position
578567..579604
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AA seq
345 aa
AA seq
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MKRTETILKISDLQVAFERGKRSLPVIEGLNLELLRGKVLGLVGESGCGKSMTALSVLRL
LPSGGRITGGEILLDNENLLELSKGEMRRIRGKRIGMIFQDPNSALNPVRRVGSQFIETL
QTHLSLERPKAKMMAESMLSTLGLSGPERLMRCYPFQLSGGMRQRVMIALALSLQPDVLL
ADEPTTALDVTVQAQILAEMKKLQDQFKTAILLVSHNLGVIAQLCDEVAVMYGGTIVETG
TVEALFTQTAHPYTQGLLYAIPHLYKSRGQTLSIIKGQPPEAGRIPQGCPFAPRCGAALE
ICRRSRPTLQQTGDDPGHQRACHFPLTWTAKQHTAQSLSRKVVSS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagaggacagagactattcttaaaataagtgacctccaggtggcctttgaaagggga
aagaggagtctgcctgtaattgaagggctgaatctggagttgttgcggggcaaagtttta
gggctggtgggagagagcggctgcggcaagagcatgaccgccctttccgttctgcgcctg
ttaccctcgggagggagaattacaggcggggaaatcttgttagataatgagaatctcttg
gaactttctaagggagagatgcgccgaattcgggggaaaagaattgggatgatttttcaa
gatcccaattcggcccttaacccggtgcgaagggttggcagccagtttatagagaccttg
caaacccacttgagcctggagcggccaaaggccaaaatgatggcggaaagtatgttaagc
actttaggactgtcaggtccggagcggttaatgagatgctatccctttcaattaagcgga
gggatgcggcagcgggtgatgatcgctttagctctgtctttacaaccggatgttttgctg
gctgacgagcccaccacagccctggatgtcaccgtacaggctcaaattctggccgaaatg
aaaaaactgcaggatcagttcaaaacggcaattctgctcgtatcccataatctgggggta
attgctcagctttgcgatgaggtagccgtcatgtacggagggactattgtagagaccggc
acagtggaagcgctttttacccagacagctcacccatatacccagggcctgctctacgca
attccccatttatataaaagcaggggtcaaaccctcagtatcattaaaggccagcctcct
gaagccggccggattccccagggctgtccctttgctccccgctgcggcgcagccctggag
atttgtcgccggagccgcccaaccttgcagcagacaggtgatgatccggggcatcaaagg
gcctgccatttccccttgacctggacagccaagcaacatacagcccaaagcctaagcagg
aaggtggtgtcttcgtga
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