Drosophila miranda: 108151988
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Entry
108151988 CDS
T06132
Name
(RefSeq) putative U5 small nuclear ribonucleoprotein 200 kDa helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
dmn
Drosophila miranda
Pathway
dmn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108151988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dmn03041
]
108151988
Spliceosome [BR:
dmn03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
108151988
Complex C
U5 SnRNP specific factors
108151988
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_30
AAA_22
Motif
Other DBs
NCBI-GeneID:
108151988
NCBI-ProteinID:
XP_017136442
LinkDB
All DBs
Position
XR:21551976..21559129
Genome browser
AA seq
2142 aa
AA seq
DB search
MADAAARQLQYEYKANSNLVLQADVRLIERPRRDEATGEVCSLVGKLDGTRMGDRYQRTK
PEKTEERKVKRQKRDEAQYDFERMKGATLLSEGIDEMVGIVYRPKTQETRQTYEVLLSFI
QEALGDQPRDILCGAADEILAVLKNDRLKDRERKRETDSLLGAVTDERFALLVNLGKKIT
DFGSDAVNALTATTNTEEQIDEQYGINVQFEESEEESDNDMYGEIRDDDVPDEGEEARID
HTLHAENLANEEAATNVKKDRILHPLDIDAYWLQRCLSKFYKDAMVSQSKSADVLKILKD
AADERDCENQLVLLLGYDCFDFIKQLKLNRQMILYCTMLASAQTDSERQRIREKMRGNTS
LAKILRQLDTGKSEEQEEGETRGNKRGKGDAEDGGAAAAGQVAGVRQLLELDELAFTHGS
HFMANKRCQLPDGSYRKQRKGYEEVHVPALKAVPFDDNEELQPIDKLPKYCQPVFEGFKT
LNRIQSRLYKAALDSDENMLLCAPTGAGKTNVALLTMMREIGKHINEDGTINTQDFKIIY
VAPMKSLVQEMVGNFGRRLACYNLVVSELTGDHQLTREQIAATQVIVCTPEKWDIITRKG
GERTFVSLVRLVIIDEIHLLHDERGPVLEALVARTIRNIETTQEDVRLVGLSATLPNYQD
VATFLRVKPDKGLFYFDNSYRPVSLEQQYIGVTEKKALKRFQVMNEIVYEKTMEHAGRNQ
VLVFVHSRKETGKTARAVRDMCLEQDTLGSFLREGSASMEVLRTEAEQVKNSELKELLPY
GFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGR
WVELSALDVLQMLGRAGRPQYDTKGEGILITNHSELQFYLSLLNQQLPIESQFISKLPDM
LNAEIVLGTVQHLQDAVNWLGYTYLYIRMLRNPTLYGVSHDAIKADPLLEQHRADLLHTA
ACCLERSGLVKYERKTGHFQVTDLGRIASHYYLTHETMLTYNQLLKQTLSEIELFRVFSL
SSEFRHISVREEEKLELQKLMERVPIPIKESIEEHSAKVNVLLQAYISQLKLEGFALMSD
MVFITQSAARLMRAIFEIVLTRGWAQLADKTLTLCKMIDRRMWQSMTPLRQFKKMPDEIA
KKLEKKHFPWSRLYDLEPHELGELIRVPKLGKTIHKFVHQFPKLELSTHIQPITRGTLRV
ELTITPDFQWDEKVHGASEGFWVLIEDVDSELILHHEFFLLKQKYAQDEHQLKFFVPVFE
PLPPQYFLRIVSDRWIGAETQLPVSFRHLILPEKNLPPTELLDLQPLPISALRQPKFESF
YAQRFPQFNPIQTQVFNAVYNSDENVFVGAPTGSGKMTIAEFAIMRLFTTQTEARCVYLV
SEEALADLVFADWHQKFGTLDIKVVKLTGETGTDLKLIAKGQLVITTADKWDVLSRRWKQ
RKNVQLVNLFIVDELQLVGGEEGPVLEIVCSRMRYISSQIEKQIRIVALSASLTDARDVA
QWLGCNPNATFNFHPSVRPIPLELHIQGFNVTHNATRIATMSKPVYNAILKYSAHKPVIV
FVSSRKQARLTAIDILTYAASDLQPNRFFHAEEEDIKPFLERMTDKTLKETLAQGVAYLH
EGLSSSDHRLVEQLFDSGAVQLAVVSRDLCWGMSISAHLIIIMDTQFYNGKNHSYEDYPI
TDVLQMVGRANRPNEDADAKCVLMCQSSKKDFFKKFINEPLPIESHLDHRMHDHFNAEVV
TKTIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVENTLSDLEQSKC
ISVEDDMDTLPLNLGMIAAYYYINYTTIELFSLSLNSKTKVRGLLEIISSAAEYEDVVVR
HHEEQVLRTLSQRLPNKLTGPNETAPKFNDPHIKTNLLLQAHLSRLQLGPELQGDTEQIL
SRAIRLIQACVDVLSSNGWLSPAVAAMELAQMVTQAMWTKDSYLRQLPHFSVDIVKRCTE
KKIETVFDIMELEDEDRSRLLQLSDAQMADVARFCNRYPNIELNYEVVDKDRINSGSTIN
VVVQLEREDEVTGPVIAPFFPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAKVKLDFVA
PSPGKHDYTLYYMSDSYLGCDQEYGFSIEVGDFQSESESESE
NT seq
6429 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgccgcagcacgtcaattgcagtacgagtacaaggcgaactctaatcttgtg
ctgcaagccgatgtacgactcatcgagcgtccacgtcgtgatgaagccactggcgaggtc
tgttccctggtgggaaagttggatggcacgcgaatgggtgaccggtaccagcgcaccaag
ccggaaaagacagaggagcggaaggtgaaacgacagaagcgtgacgaagcccagtacgat
ttcgagcgcatgaagggtgccactctgctctctgagggcattgacgagatggtcggcatt
gtgtaccgcccaaagacccaggagacgcgtcagacctacgaggtgctgctgagtttcatc
caagaggccttgggggatcagcccagagatatcctgtgcggtgcggcagatgagatcttg
gctgtgctgaagaatgatcggctaaaggatcgcgaacgcaagcgggaaacggacagcctg
ctgggcgcggtgacagatgaacgattcgcgttgctggtcaacctgggcaagaagatcaca
gactttggcagcgatgccgtaaacgcactgacagccaccaccaacacggaggagcagatt
gacgagcagtacggcatcaacgtgcagttcgaggagtccgaggaggagagcgacaacgac
atgtatggcgagatacgggacgatgatgtgccagatgagggcgaagaggcgcgcattgat
cacaccctgcacgcagagaaccttgccaatgaggaggctgccaccaatgtaaagaaggat
cggatcctccatcccctggacatcgatgcctactggctgcagcgttgcctcagcaagttc
tacaaggatgccatggtgtcgcagagcaagtctgcagatgtgctcaagatcctgaaagat
gccgccgatgagcgggactgcgagaaccagttggtgctgctgctgggctacgattgcttt
gacttcatcaagcagctgaagctgaatcgccagatgatcctctactgcaccatgctggcc
tctgcccagacggacagtgagcgccagcggatacgcgaaaagatgcgcggcaacacgtcc
ctcgcgaaaatcctgcggcagctggacacgggcaagtcggaggagcaggaagagggtgag
acgagaggcaataagcggggcaagggcgatgctgaagatggtggcgcagcagcggccggc
caggtggctggcgtgcgtcaactgctggagctggacgagctggccttcacccacggctcc
catttcatggcgaacaaacgctgccaactgcccgacggttcctacaggaagcagcgcaag
ggctacgaggaggtgcacgtccccgcactcaaggccgtaccctttgacgacaacgaggag
ctacagcccatcgataagctgcccaagtactgtcagcccgtcttcgaggggttcaagacc
ctgaatcgcatccagagtcgcctgtacaaggcagccctcgacagcgacgagaatatgctg
ctgtgtgcccccaccggtgcgggcaaaacgaatgtggctctgctcacaatgatgcgggag
atcgggaagcatatcaacgaggatggcaccatcaatacgcaggatttcaagatcatctat
gtggccccaatgaagtctttggtgcaggaaatggttggaaactttggacgacgtctcgcc
tgctataatctcgtcgtgtccgagctgacgggcgaccatcagctgaccagagagcagata
gccgccacccaggtgattgtgtgcacgccggagaagtgggacatcatcacccggaagggg
ggagagcgcacgtttgtcagtctggtgcgtttggtcatcattgacgagatccatctgctg
cacgatgaacgtggtccggtgctggaggcactggtggctcgtaccattcggaatattgag
acgacgcaggaagatgtgcgcctggtggggctatccgccaccctgcccaattaccaggat
gtggccacgttcttgcgcgtcaaaccggacaagggcctcttctactttgacaacagctat
cgtcccgtatccctggagcagcagtacatcggtgtgacggagaagaaggccctcaagcgt
ttccaggtgatgaacgagatcgtctacgagaagaccatggagcatgcgggacggaatcaa
gtgctggtgtttgtccactcgcgcaaggagaccggcaagacggcccgagcggtgagggat
atgtgcctggagcaggacaccttgggcagcttcctgagagagggttcggccagcatggag
gtgctccgcacggaggccgagcaggtaaagaactcggaactgaaggagctccttccctac
ggcttcgccatccatcatgccggaatgacgcgcgtcgatcgtaccttggtggaggatctc
tttgcggatcgtcacatccaggtgctggtatccacggccaccctggcctggggcgtcaat
cttcccgcacacacggtgatcatcaagggaacgcaggtctacaatccggagaagggacgc
tgggtggagctgagcgcattggatgtcctccagatgttgggtcgtgccggacgaccccag
tacgacaccaagggcgagggcatcctcataaccaatcacagcgagctgcagttctacttg
tcgctgctcaaccagcagctgcccatcgagtcgcagttcatctcgaagctgccggacatg
ctcaacgccgagattgtcctcggcacagtgcagcatctgcaggatgccgtcaactggctg
ggctacacgtacctctacatccgcatgctgaggaaccccacgctctatggggtctcgcat
gacgccatcaaggcggatcccctgctggagcagcatcgagcggatctgctgcacacggcc
gcctgttgcctggagcggagcggtctggtcaagtacgagcggaagacgggacactttcag
gtgacggatctgggacgcattgcatcccactattatctcactcacgagacgatgctcacg
tacaaccagctgctgaagcagacgctcagcgagattgagctgtttcgggtgttctcgctg
tcctcggagttccgtcacatttcggtgcgggaggaggagaagctggagctgcagaagctg
atggagcgcgtgcccatacccatcaaggagtccatcgaggagcacagcgccaaggtgaat
gtcctgctgcaggcgtacatttcccaactgaagctggagggctttgccctgatgtcggac
atggtcttcatcacccagtcggctgctcggctcatgagagccatcttcgagattgtcctc
acgcgtggctgggcacagttggccgacaaaacgctgacgctgtgcaagatgattgaccgg
aggatgtggcagtcgatgacaccgctgcggcagttcaagaagatgcccgacgaaatagcc
aagaagctggagaagaagcacttcccctggtcgcggctgtacgacctggagccgcacgag
ctgggcgagctgatccgcgtgccgaagctgggcaagaccatacacaagtttgtgcatcaa
ttccccaagctggagctttcgacgcacatccagccgatcacccgaggcacccttagagtg
gagctgaccatcacgccggacttccagtgggacgaaaaggtacatggcgcctcggagggc
ttttgggtgctcatcgaggatgtcgactcggagctgatactgcatcatgagttctttctg
ctgaagcagaagtacgcccaggacgagcatcagctgaagttctttgtgcccgtctttgag
cctttgccgccgcagtactttctccggatcgtctccgatcgctggattggcgcagagacc
cagctgcccgtctcgttcaggcatttgatactgccggagaagaatctaccgcccacggag
ctgctggatctgcaaccgctgccgatcagtgctctgcgtcagccgaaattcgagtcgttt
tacgcgcagcgcttcccccagttcaatcccatccagacgcaggtcttcaacgccgtctac
aacagcgacgaaaatgtgtttgtgggcgccccaacaggttccggcaagatgacgatcgca
gagttcgccatcatgcgactgttcaccacccagacggaggcccgctgcgtctacttggtg
tccgaggaggccctcgctgacctggtctttgccgactggcatcaaaagttcgggacactg
gacatcaaggtggtgaagctgacgggcgaaactggaacggatctgaagctgatagccaag
ggacagctggtgatcacgacggctgacaagtgggatgtgctctcgcgacgctggaagcag
aggaagaacgtccagctggtgaatctgttcattgtcgacgaactgcagctggtgggcggc
gaggagggtcctgtgctggagattgtgtgctccaggatgcggtacataagctcgcagatc
gagaagcagatcagaatcgtggccctgtccgcctctctgaccgatgcccgggatgtggcc
cagtggctgggctgcaatccgaatgccaccttcaatttccatccaagtgtgagacccatt
cctctggagctgcacattcagggattcaatgtgacgcacaatgcgaccagaatcgccacc
atgtcgaagccggtgtacaatgccatcctcaagtacagtgcccacaagccggtgattgtg
tttgtctcctccaggaagcaggcacggctgacggccatcgatatcctgacgtacgctgcg
tccgatctgcaaccgaatcgtttcttccatgccgaggaggaggacatcaagccattcctg
gagcgaatgaccgacaagaccctgaaggagaccctggcccagggtgtggcctacctgcac
gagggtctgtcctcgtcagaccatcgtttggtggagcaactcttcgattcgggcgctgtg
cagctggccgtcgtctcgcgcgatctctgctggggcatgagcatctcggcccatctaatc
atcatcatggacacgcagttctacaacggcaagaatcactcgtacgaggactaccccatc
acggacgtgctccagatggtgggacgcgccaatcggcccaacgaggacgccgatgccaag
tgcgtgctcatgtgccagagcagcaagaaagacttcttcaagaagttcatcaacgagccg
ctgcccatcgaaagccatctcgatcatcgcatgcacgaccacttcaatgccgaggtggtg
accaaaacgattgagaacaagcaggatgccgtggactatctcacgtggacattcctctac
aggcgattgacccagaatcccaattactacaatcttcagggcgtcacacatcgccatctg
tccgatcatctgtccgagctggtggagaacactctcagtgatctggagcagtccaagtgc
atcagtgtcgaggacgacatggataccctgccgctcaatctgggcatgattgcggcctat
tattacatcaactatacgaccattgagctcttcagtttgtccttgaacagcaagaccaaa
gtgcgcggcctgctggagatcatctcgtcggcagcggagtacgaggatgtggtggtcagg
catcacgaggagcaggtcctgcgcactctgtcccagcgcctgcccaacaagctcacagga
cccaatgagacggcacccaaatttaatgatccgcatatcaagaccaatttgctgctccag
gcacatctgtcgcggctgcagttgggacccgaactgcagggcgacacggaacagatattg
agccgggccattcgtctgatacaggcctgtgtggatgttttgagctcgaatggatggctt
tcgccggccgtggctgccatggaactggcccagatggtcacccaggccatgtggaccaag
gattcctacttgcgacaattgcctcactttagtgtcgatattgtcaagcgatgcactgag
aagaaaatcgaaactgttttcgacatcatggagctggaggatgaggatcgttcgcgtctg
ttgcagctctccgatgcgcagatggccgatgtggcccgattctgcaatcggtatcccaac
attgagctcaactatgaggtggtcgataaggaccgcatcaattcgggatccacgatcaat
gtggtggtccagctggagcgcgaagatgaggtcaccggccccgtcatcgcacccttcttc
ccgcagaagcgcgaggagggctggtgggtcgttattggtgatcccaagactaattccctg
ctctccatcaaacgcctcacgctccaacagaaggccaaggtcaagctggactttgtggcc
cccagtccgggcaaacatgactataccttgtactacatgagcgactcctacttgggctgc
gatcaggagtacggtttctccatcgaggtgggcgatttccagtcggagagtgagagcgag
tcggaatag
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integrated database retrieval system
