Drosophila miranda: 108162387
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Entry
108162387 CDS
T06132
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
dmn
Drosophila miranda
Pathway
dmn04140
Autophagy - animal
dmn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dmn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108162387
04148 Efferocytosis
108162387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dmn04131
]
108162387
Membrane trafficking [BR:
dmn04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
108162387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
WD40
zf-RING_5
TPR_7
TPR_1
zf-C3H2C3
SGL
zf-ANAPC11
TPR_12
zf-RING_11
TPR_10
Motif
Other DBs
NCBI-GeneID:
108162387
NCBI-ProteinID:
XP_017152590
LinkDB
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Position
4:complement(3815370..3820452)
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AA seq
845 aa
AA seq
DB search
MAEKLPANSDSGTESTEEEEEVEPKFKYQRIANDLKNILNADVVTCTAVHSKFLIFGTFR
GRVYLLDHQGNSVESNLSSTEQHTHKVAVNQVDVDPKGEYVATCSDDGKVNITGLFSCEN
NQNLSFGKCIKVVALDPDPKSRVRRFIVGEDKLTLYERNLLKKLKPTELCAVEGSVLSIC
WQGNFVAWASHLGVRVYDLSEKCSLGLMKWEVPSQARLENFRCHLRWSNEHTLLIGWVDT
IRICVIRKRNGIEAASSNLPGYVVDPVSTFQTTFYICGLAPLASNQLVVLGYRKERSATY
KALRPVLCVIEYKMNSSEEICTDSLTLRGFEEYTVNDYSLGCIIEENRYFIVAPKDIVVA
SLIETDDRVEWLIKHSKFEEAIDLISTHGGSLPILSVARLYINHLLTLKQYEDAAKLCLR
MLGNNKALWEEEVFKFVKCQQLRSVSAYLPTSEDCKLDPHVYEMVLYEFLKFDAKGFLNL
IKEWPPQLYDGLAVINAIHDNFRKQNANELLESLALLYSYQGDFESALRMYLKLQNKDVF
ELIRRYELYDVISKLIIPLIHLDRERAFKILLDKKKIKPEVVVQQLEQNQEYLYWFLDDL
HKIDSSNVFQRKLVELYAKYDRSKLLPFLRRSKEYVIQDALAICKREGFYPEMVYLLGCM
GGVEAVEALNIIIHSMNDIEMAIEFCKEHNDNDLWNVLIDESTKQPEIVTKVLDGIVDYV
NPEIVVSKIKLGQTIPNLRKSVIKMLWHYNSQKEVLCTSHEIQLDDYFDSHSEVVAFRRR
AQHVTYDHHCPQCHRPVLMKSTSHRNGLVAFKCGHIYHQLCIPGSTTSGQCGECNMGNSD
RSEEE
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaagctgccagccaatagcgactctggaacggagagcaccgaggaggaggaa
gaagttgagcccaaattcaagtaccagcgcatagccaacgatctcaagaatatactcaac
gcagatgtggtcacatgcactgctgtgcattccaagtttcttatatttggcacgtttcgt
ggacgcgtctacctgctggatcaccaaggaaactcggtcgagtcgaatctgagcagcacc
gagcagcacacgcacaaagtggcagttaaccaggtcgacgtcgacccaaagggcgagtat
gttgccacatgctccgacgatggcaaggtcaacataacggggctcttcagctgcgagaac
aatcagaatcttagttttggaaaatgcatcaaagttgtggccttagatccggatccaaag
tctcgcgtcagacggttcatagtgggcgaggacaaactcaccctatatgagcgcaatctc
ctcaagaagctgaaacccaccgagctgtgtgcagtcgaaggcagcgtcttgtcgatttgt
tggcaggggaactttgtggcctgggcaagccacctcggcgttcgcgtctatgatttaagt
gagaagtgctctttaggattgatgaaatgggaagttccttcgcaggcgcggctcgaaaac
tttcgctgccacttgcgctggtccaatgagcacacattgctcattggctgggtggacacc
atcaggatttgtgtgatacgcaagcggaatgggattgaagccgcgtctagcaatttaccg
ggctatgttgtggatcccgtctcgacatttcaaactactttctatatttgtggactggcc
ccactggcgtcaaaccaattagtggtacttggctaccgtaaagagcgcagtgcaacctac
aaagcgcttcgacccgtgctgtgcgtcattgagtacaagatgaatagcagcgaagagatc
tgcacagacagtctgacgctccgtggcttcgaggagtacactgtcaacgactacagtcta
ggctgcataattgaggagaatcggtattttattgtggctcccaaggatattgtggtggcg
agtcttatagaaacggacgatcgtgttgagtggctgattaagcacagtaaattcgaggag
gctatcgacctgatatcgacacatggcggcagcttgccaattctttcagttgccaggttg
tatataaaccacctgctgacgctcaaacaatacgaagatgctgccaaactttgcctgcga
atgctaggcaacaataaagcgctttgggaagaggaggtcttcaagtttgtcaaatgtcaa
caattgcgctctgttagtgcctacttgccgacctccgaggactgcaaattggatccccat
gtctatgaaatggttttgtacgagtttctgaagtttgacgccaaggggtttctgaacctg
atcaaggaatggccgccgcagctctacgacgggttggcggtgataaatgccatacatgac
aactttcgcaaacagaatgcgaacgaattgctagaatcgcttgccctcctctactcgtat
caaggggacttcgagagcgccttgcggatgtatttaaaattacagaacaaggatgttttt
gaattaatacgtcgctatgagctctacgatgtaatttctaagttaatcattccactcatt
cacttggatcgcgagagagccttcaagatattactggacaaaaaaaaaataaagcctgaa
gtcgtcgtgcagcagctagaacagaatcaggagtacctatactggttcttggacgaccta
cataagatcgacagcagcaatgtatttcaacgaaaattagtagagttgtatgcaaaatac
gatcggtcgaaactattgcccttcctacgacgttccaaggaatatgtcatacaggatgcg
ttggccatttgcaagcgcgaaggtttctacccggaaatggtctacttgcttggctgcatg
ggcggagtagaagctgtagaagcccttaatattatcattcacagtatgaacgacattgaa
atggctattgagttttgcaaggagcacaatgacaatgatctgtggaatgtgcttattgat
gagtccacaaagcagcccgaaatagtgacgaaggtcttggacggcattgtcgactatgtg
aatccggagatagtagttagtaaaataaaacttggacagaccataccaaatctgcgtaaa
tcggtaattaaaatgctctggcactacaacagccaaaaggaggtgctctgcacgtcccat
gagattcaactggacgactattttgacagccattcagaagtggttgcctttcggcgacgt
gcccagcatgtaacctacgaccaccactgtcctcaatgccatcgtccagttctgatgaaa
agcacgtcccaccgcaatggcctagttgcattcaaatgtggtcatatctaccaccagttg
tgtattcccggtagtaccaccagtgggcaatgcggcgagtgcaatatggggaacagtgat
cgaagcgaggaggagtag
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