Deinococcus maricopensis: Deima_0032
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Entry
Deima_0032 CDS
T01412
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
dmr
Deinococcus maricopensis
Pathway
dmr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Deima_0032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmr03400
]
Deima_0032
DNA repair and recombination proteins [BR:
dmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Deima_0032
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Deima_0032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
SGNH
AAA_22
Caps_syn_GfcC_N
Kinesin
Motif
Other DBs
NCBI-ProteinID:
ADV65696
UniProt:
E8U402
LinkDB
All DBs
Position
32964..34979
Genome browser
AA seq
671 aa
AA seq
DB search
MLRVQSEFTPSGDQPTAIRSLVDGLESGLRYQTLLGATGTGKTYSMAKVIEETGRPALIM
APNKILTAQLASEFREFFPGAAVEFFVSYYDYYQPEAYVPGKDLFIDKDANINQELERLR
HSTTRSLLTRRDTIVVASVSCIYGLGDPEEYRALNLVLKVGQPIGRDAILDRLVELQYDR
NDIELAPGRFRAKGDVIEIWPSYDEQPLRLELWGDDLDRIVLYHPVSGDVQAELDATVVY
PAKHYVSSAGNIERAIVTIQQELDERVEYFKASGKLLEAQRIKERTLYDLEMLKVLGYCS
GIENYSRHIDGRKPGETPYTMLDYFASDFVTFVDESHVTIPQVGGMSNGDRARKQTLVDY
GFRLPSAMDNRPLNFGEFLGKIGQTVFVSATPGPFEREHSDSIADQIIRPTGLVDPVVQL
RPIKGQVEDILGRVRERAAKGERTLVTTLTKRMAEDLAEYLLDKGVRARYMHSDIDTVER
QVIIRDLRLGHYDVLIGINLLREGLDLPEVSLVAILDADKPGFLRSERSLIQTIGRAARN
VNGEVILYGDSITPAMQAAMEETARRREKQLAYNAEHGITPTTIRKGVRDVIRGEEEAEL
PQSPDLGNDRDALMTQLTDLELDMWRASEDLDFEKAASLRDQIRAIEAKLQGKTFEQPTV
PGQKVRKRGRR
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgctgagggtccagtctgaatttacaccgagcggagaccagccgacagccattcgcagc
ctcgtggacggcctggagtccggtctgcggtaccagaccctcctgggcgccaccggcacc
ggcaaaacctacagcatggcgaaagtcatcgaggaaaccggccgccccgcgctcatcatg
gcgcccaacaagatcctcaccgcgcagctcgccagtgagttccgcgagttcttccccggc
gccgccgtcgagttcttcgtgtcgtactacgactactaccagcccgaagcgtacgtgccc
ggcaaggacctgttcatcgacaaggacgccaacatcaaccaggagctcgagcggctgcgg
cactccaccacccgcagcctcctcacgcgccgcgacaccatcgtcgtcgccagcgtctcc
tgcatctacggcctcggcgaccccgaggagtaccgcgccctgaacctcgtcctgaaagtc
ggtcagcccatcggccgcgacgccatcctcgaccgtctcgtggagttgcagtacgaccgt
aacgacatcgagctcgccccgggccgcttccgtgcgaaaggcgacgtgatcgagatctgg
cccagctacgacgagcaaccgctgcggctcgaactgtggggcgacgacctcgaccgcatc
gtcctgtaccacccggtcagcggcgacgtgcaggctgaactcgacgccaccgtcgtgtac
ccggccaagcactacgtcagctcggcagggaacatcgagcgcgccatcgtcaccatccag
caggaactcgacgaacgcgtcgagtacttcaaggcgtccggcaagctgctcgaagcgcag
cgcatcaaagaacgcaccctgtacgacctggagatgctcaaggtcctcgggtactgctcc
ggcatcgagaactactcccgccacatcgacggccgcaaacccggcgaaacgccctacacc
atgctcgactacttcgcgtcggacttcgtgacgttcgtggacgagtcgcacgtgacgatc
ccgcaggtgggcggcatgagcaacggcgaccgcgcccgcaagcagaccctggtcgactac
ggcttccgcctgccgagcgccatggataacagaccgctgaacttcggggagttcctcggc
aagatcgggcagacggtgttcgtgagtgccacgcccggcccgtttgagcgggagcacagc
gacagtatcgccgaccagatcatccgccccaccggcctcgtcgacccggtcgtgcagctc
cgccctatcaagggccaggtggaggacatcctcggccgcgtccgtgagcgcgccgcgaaa
ggcgagcgtacactcgtcaccaccctcaccaaacgcatggccgaggacctcgcggagtac
ctgctcgacaagggcgtccgcgcgcgctacatgcacagcgacatcgacaccgtggaacgc
caggtgatcatccgcgacctgcgcctcgggcactacgacgtcctgatcggcatcaacctg
ctgcgcgaaggccttgacctgcccgaggtgagcctcgtggcgatcctcgacgccgacaag
cccggcttcctgcgctcggaacgcagcctgatccagaccatcggccgcgccgcccgcaac
gtgaacggcgaggtgatcctgtacggtgacagcatcacgcccgccatgcaggccgcgatg
gaggaaaccgcgcgccgccgcgagaagcagctcgcgtacaacgccgagcacggcatcacc
cccaccaccatccgcaaaggcgtccgcgacgtcatccgcggcgaggaagaagccgaactg
ccgcaatcgccggacctcggcaacgaccgcgacgcgctcatgacgcaactcacggacctc
gaactcgacatgtggcgcgccagcgaggacctcgacttcgagaaggccgccagcctgcgc
gaccagatccgcgctatcgaagcgaaactgcagggcaaaaccttcgagcagcccaccgtc
cccggccagaaagtccgcaaacgcggccgccgttga
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