Deinococcus maricopensis: Deima_0473
Help
Entry
Deima_0473 CDS
T01412
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dmr
Deinococcus maricopensis
Pathway
dmr03030
DNA replication
dmr03430
Mismatch repair
dmr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Deima_0473
03430 Mismatch repair
Deima_0473
03440 Homologous recombination
Deima_0473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dmr03032
]
Deima_0473
03400 DNA repair and recombination proteins [BR:
dmr03400
]
Deima_0473
Enzymes [BR:
dmr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Deima_0473
DNA replication proteins [BR:
dmr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Deima_0473
DNA repair and recombination proteins [BR:
dmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Deima_0473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
Motif
Other DBs
NCBI-ProteinID:
ADV66133
UniProt:
E8U4Z4
LinkDB
All DBs
Position
complement(557208..561206)
Genome browser
AA seq
1332 aa
AA seq
DB search
MTVPADAAPHIHLPDGSCCTPKRFAHLHQHTQYSLLDGAAKLKDLLKWAKEVTPDGCTPA
LAMTDHGNMHGAVHFYNYATGMGVKPIIGYEAYVVPGVGTRRERTRGQDGEKGIFHLTLL
ARDFEGYQNLCRLSSRGYTEGYYYKPRIDHELLQEHHKGVIAFSGCLGSEVQQLLLQGRE
ADAKQRLMWYRDLFGENYFIEIQDHGLPEQKRNNPILRAWAQELGIGMVATNDGHYVKKS
DATAHETLLAIQTKATLADENRFKFPCDEFYVKNLEEMQAALPVSEWGEEPFDNTAMIAD
LCNVDLPVGKKRVYQMPALPIPEGRTMAEELRVQTYAGSLKRYPHHVTEGLLRAYAKRSL
DALGADDAAAVLRRVPGCDASTCDVDTLLTLVAFMGSVWEARGKAAGEKFTKYPALEELE
AEAASGQLPFYALRDWRRAEGAETVTDTDIQLDPGSVEHESACAHHRHALVLLRRAEYEL
SVINNMGFPDYFLIVADYINWAKDHGISVGPGRGSGAGSLVAYAIRITNLDPLEFELLFE
RFLNPDRISMPDFDIDFNDARRGEVITYVQQKYGDDKVAQIATFGTMASKACLKDVARVM
GLEYAKVDKVSKLIPIKFGKSYSLEQARESVPDIQQMLDEDAQLREAYEFAQKLEGLTRH
ASVHAAGVVIGKTQLTDLVPVMRDTSGEGMVCQYDMKAVEDIGLIKMDFLGLRTLSFLDE
AKRIMRESKGIEVDFDAIPFDDEATFDLLSRGDTKGVFQLEGAGIADASRRLKPRRLADI
IALSALYRPGPMENIPTYVRRHHGLEQVDYVRDGFPNSAQWLEKILAETYGIPVYQEQIM
QIASEVAGFSLGGADLLRRAMGKKDAEEMKRQRQIFVDGAEGNGVPKDEGNKLFDLLDAF
ANYGFNKSHSAAYGVITYQTAWLKANHPVEFMAALLTVERRDSDKVAEYASDARKMGVTV
LPPDINRSGADFKVVGQDIYFGLYAIKGLGENAVLRILDERERGGRFRSLADFCARIDNK
TCNRKGLESLIKSGAFDAFGERQQLLSSLEDAIAWAQGAAAMLNSGMDALFGMAETAPEP
KLRANVEPLSELAKLALEKEALGLYISGHPLEQHEGLREAASTRIADLDDWFFTQPQTGG
RNRVKAVLAGMIEGVVKKPTKSGGMMARFNLADETATIELVAFSRAYDRIQDKLINDTPA
LVIVELESEEGSLRAIAEEVVPAEALADIPKVMYVNIDLDQTSTDALADFQSYLDEHAGT
LPTYFRFESGDHYMVYQLDKPIGGPDSMRVVNSTFPWARAYLAMDTQMILNRYAPKPPAW
QQRQNAARTLQA
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgcccgccgacgctgccccgcacattcacctgcctgacggctcctgctgcacg
ccgaaacgcttcgcgcacctgcaccagcacacccagtacagcctcctggacggcgccgcg
aaactcaaggacctgctgaagtgggccaaggaggtcacgccggacggctgcacgcccgcg
ctcgccatgacggaccacgggaacatgcacggcgcggtgcacttctacaattacgcgacc
ggcatgggcgtgaagcccatcatcgggtacgaggcgtacgtcgtgccgggcgtcggcacg
cgccgtgagcgcacgcgcggccaggacggcgagaagggcatcttccacctgacgctgctc
gcgcgggacttcgaggggtaccagaacctctgccgcctcagttcacgcgggtacaccgag
gggtactactacaagccccgtattgaccatgagctgctgcaggagcaccacaagggcgtc
atcgcgttttccgggtgcctggggtcggaggtgcagcagctgctgctgcagggccgcgag
gcggacgcgaagcagcggctgatgtggtaccgggacctgttcggcgagaactacttcatc
gagattcaggaccacggcctgccggagcagaagcgcaacaacccgattctgcgggcgtgg
gcgcaggagctcgggatcggcatggtcgccacgaacgacgggcattacgtcaagaagagc
gacgcgaccgcgcacgagacgctgctcgccattcagacgaaggcgacgctcgcggacgag
aaccgcttcaagttcccgtgcgacgagttctacgtgaagaacctcgaggaaatgcaggcg
gcgctgcccgtgagcgaatggggcgaggaaccgtttgacaacaccgccatgatcgcggac
ctgtgcaacgtggacctgccggtcgggaagaagcgcgtgtaccagatgccggcgctgccc
atcccggaagggcgcaccatggcggaggaactgcgcgtgcagacgtacgcgggcagcctg
aaacgctacccgcaccacgtgaccgaggggctgctgcgcgcgtacgcgaaacgcagcctg
gacgcgctcggcgcggacgacgcggcggcggtgctgcggcgcgtgcctggctgcgacgcg
agcacctgcgacgtggacacgctgctcaccctggttgcgttcatggggagcgtctgggag
gcgcgcggcaaggccgccggcgagaagttcacgaagtacccggcgctggaggagttggag
gccgaggcggccagcgggcagctgccgttctacgcgctgcgggactggcggcgcgcggag
ggggcggagaccgtcaccgacacggacattcagctggacccgggcagcgtggagcacgag
agtgcctgcgcgcaccaccggcacgcgctggtgctgctgcggcgcgcggagtacgagctg
agcgtcatcaacaacatgggcttcccggattacttcctgatcgtcgcggactacatcaac
tgggcgaaggaccacggcatcagcgtcggcccgggccgcgggtcgggcgcgggcagcctt
gtggcgtacgcgattcgcatcacgaacctcgacccgctggagttcgagctgctgttcgag
cgcttcctgaacccggaccgcatctcgatgcccgacttcgatatcgacttcaacgacgcg
cgccgcggcgaggtcatcacgtacgtgcagcagaagtacggtgacgacaaggtcgcgcag
atcgccacgttcgggacgatggcgtccaaggcgtgcctgaaggacgtcgcgcgcgtgatg
ggcctggagtacgcgaaggtggacaaggtcagcaagctgattcccatcaagttcgggaag
agctactcgctggagcaggcgcgcgagagcgtgccggacattcagcagatgctcgacgag
gacgcgcagttgcgcgaggcgtacgagttcgcgcagaaactcgagggcctcacgcggcac
gcgtcggtgcacgcagccggcgtcgtgatcggcaagacgcagctcacggacctcgtgccc
gtcatgcgggacacgtccggcgagggcatggtctgccagtacgacatgaaggccgtggag
gacatcggcctgatcaagatggacttcctggggttgcgcaccctgtcgttcctcgacgaa
gccaagcgcatcatgcgcgagtcgaagggcatcgaggtggacttcgacgccatccccttc
gatgacgaggccacctttgacctgctgtcgcgcggggacaccaagggcgtgtttcagctg
gaaggcgcgggcatcgcggacgccagccgccgcctgaagccgcgccgcctcgcggacatc
atcgcgctgagcgcgctgtaccgcccgggcccgatggagaacatccccacgtacgtgcgc
cgccaccacggcctggagcaggtggactacgtgcgtgacggcttcccgaacagcgcgcag
tggctggagaagatcctcgcggaaacctacggcatcccggtgtaccaggagcagatcatg
cagatcgcgtccgaggtcgcgggcttcagcctgggcggcgcggacctgctgcgccgcgcc
atgggcaagaaggacgccgaggagatgaaacgccagcggcagatcttcgtggacggcgcc
gaggggaacggcgtgccgaaagacgaggggaacaagctcttcgacctgctggacgccttc
gcgaactacggcttcaacaagtcgcactccgcggcgtacggcgtgatcacgtaccagacg
gcgtggctcaaggcgaaccacccggtggagttcatggcggcgctgctcacggtggagcgc
cgggacagcgacaaggtcgcggagtacgcctcggacgcgcgcaagatgggcgtgacggtg
ctgccgccggacatcaaccgttccggcgcggacttcaaggtcgtcgggcaggacatctac
ttcgggctgtacgccatcaagggcctcggcgagaacgccgtgctgcgcatcctggatgag
cgcgagcggggcgggcgcttccggagcctcgcggacttctgcgcgcgcattgacaacaag
acctgcaaccgcaagggcctggaaagcctgatcaagagcggcgcgttcgacgcgttcggg
gagcgtcagcagctgctcagcagcctggaggacgccatcgcgtgggcgcagggggccgcc
gcgatgctgaacagcggcatggacgccctgttcggcatggccgagacggcgccggagccg
aagctgcgcgcgaacgtggagccgctgtcggagctcgcgaagctggcgctcgaaaaagaa
gcgctggggttgtacatcagcgggcacccgctggagcagcacgagggcctgcgggaggcg
gccagcacccgcatcgctgacctcgacgactggttcttcacgcagccgcagacgggcggg
cgcaaccgcgtgaaggccgtgctggcgggcatgatcgagggcgtcgtgaagaagcccacc
aagagtggcggcatgatggcgcgcttcaacctcgcggacgagacggccaccatcgaactc
gtggcgttcagccgcgcgtacgaccgcatccaggacaagctcatcaatgacacgcccgcc
ctggtgatcgtggaactggaaagcgaggaggggtcgctgcgcgccatcgcggaggaggtc
gtccccgccgaggcgctcgcggacatcccgaaggtcatgtacgtgaacatcgacctggac
cagaccagcacggacgccctcgcggacttccagagctacctggatgagcacgcgggcacg
ctgcccacgtacttccggttcgagagcggcgaccactacatggtgtaccagctcgacaaa
cccattggcgggccggacagcatgcgcgtcgtgaacagcaccttcccgtgggcgcgcgcg
tacctcgcgatggacacgcagatgatcctgaaccgctacgcgcccaaaccgcccgcgtgg
cagcaacggcagaacgccgcgcgcaccctgcaggcgtga
DBGET
integrated database retrieval system
