Deinococcus maricopensis: Deima_1604
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Entry
Deima_1604 CDS
T01412
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dmr
Deinococcus maricopensis
Pathway
dmr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Deima_1604
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmr03400
]
Deima_1604
Enzymes [BR:
dmr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Deima_1604
DNA repair and recombination proteins [BR:
dmr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Deima_1604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
nSTAND3
AAA_16
PhoH
AAA_28
AAA_22
T2SSE
AAA
Helicase_RecD
MeaB
NTPase_1
KTI12
ETF_alpha
ABC_tran
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ADV67253
UniProt:
E8U864
LinkDB
All DBs
Position
complement(1724587..1726734)
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AA seq
715 aa
AA seq
DB search
MLDTSSPHPALCCTRNVTERTPTAQPHLQVTGTVQKVRYRADSGFAVLTASIRNDHGEDP
DATLVGPVPPLEAGDAFTATVVVEEHREYGPQYKVIGMILDAHPTDLNEAGVAAYLEARV
GGVGRVLAGRIARAFGSATFDILTDDPKRLLQVPGVTQSTLHKILVSWEEQGGERRTLAA
LQGMGLSVGQAQRALKHFGVAAIERLQTDLYALTEVEGIGFLTADKLAQEQGMPQDDPRR
LTAAAVYALQLAGTSGGHTYLPRPRAVRGLMHYTRVNEGLAEAALENATTFGRLADDDGR
IYLPHALRAEKKLAQTVRTLLATPPQDEWTVKRGAAKGLSDEQEQVLHLLEHHRLVVLTG
GPGTGKSTTTRAVADLAEKLGLEVGLCAPTGKAARRLGEVTGRTASTVHRLLGYGPEGFR
FGAMEPVMFDLIIVDEVSMMGDTLMLALLQAVPPGARILLVGDSDQLPPVDAGLPLAALT
AAAPTVRLSRVYRQAMDNPIIGAAHAIMHAQAPTFGDPRLQFHAVETDTGARRVALLVRE
LGGPGKVQVLTPMRKGPLGMDTLNTHLQTLFNPGDGGVRIGDTHARPGDLVVQTKNDYQN
EIFNGTVGTVLDMEGNTLTIDFDSNVVTLSGAELWNLNLAYALTVHRGQGSEWPTVLGVL
HEAHGPMLNRNLAYTALTRARERFIGVGSESAWRAAATRARDARHTHLLERIQAK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacacttcatccccccaccccgcgctatgctgcacacgtaacgtgaccgagcgc
acccccaccgcacaaccccacctgcaagtcaccggtacggtccagaaagtccgctaccgc
gcggacagcggcttcgccgtgctcacggccagcatccgcaacgaccacggcgaggacccc
gacgccaccctcgtcggccccgtcccccccctcgaagccggtgacgccttcaccgccacc
gtcgtcgtcgaggagcaccgcgaatacggcccgcaatacaaggtcatcggcatgatcctt
gacgcgcaccccacggacctgaacgaggccggcgtcgccgcgtacctggaggcgcgcgtc
ggcggcgtggggcgcgtcctcgccggacgcatcgcccgtgcgttcgggtccgcgaccttc
gacatcctcaccgacgaccccaaacgcctgctgcaggtgcccggcgtcacccagagcacc
ctgcacaagatcctcgtgtcctgggaggagcagggcggggagcgccgcaccctggccgcc
ctgcagggcatgggcctgagtgtcgggcaggcgcagcgcgccctgaaacacttcggggtc
gccgccatcgaacgcctccagacggacctgtacgccctcaccgaagtcgaaggcatcggg
ttcctcaccgccgacaagctcgcgcaggaacagggcatgccgcaggacgacccgcgccgc
ctcaccgccgccgccgtgtacgccctgcaactcgcgggcaccagcggcgggcacacctac
ctcccccgcccgcgcgcggtgcgcggcctgatgcactacacccgcgtgaacgagggcctc
gcggaagccgcgctggagaacgccaccaccttcggccgcctcgccgacgacgatggccgc
atctacctcccgcacgccctgcgcgccgagaaaaaactcgcgcagacggtccgcacgctg
ctcgccacgcccccgcaggacgaatggaccgtcaagcggggcgccgcgaaaggcctcagt
gacgagcaggagcaggtcctgcacctgctcgaacaccaccgcctggtcgtcctgacgggc
ggtccgggcaccggcaagagcaccacgacgcgcgccgtcgcggacctcgcggagaagctc
ggcctggaagtcgggctgtgcgcgccgaccggcaaggccgcccggcgcctcggcgaggtg
acgggccgcacggccagcaccgtgcaccgcctgctcgggtacggcccggaaggcttccgg
ttcggcgcgatggaacccgtcatgttcgacctgatcatcgtcgacgaagtcagcatgatg
ggcgacacgctgatgctcgcgctgctgcaggccgtcccgcccggcgcgcgcatcctgctg
gtgggcgacagtgaccagctccccccggtggacgcgggcttgccgctcgcggcactcacc
gccgccgcgcccaccgtgcgcctcagccgcgtgtaccgccaggcgatggacaaccccatc
atcggggcggcacacgccatcatgcacgcgcaggcgccgacgttcggcgacccccggctg
cagttccacgcggtcgagacggacacgggcgcgcgccgcgtggccctgctcgtccgcgaa
ctcggcgggcccggcaaggtacaggtgctcacgcccatgcgcaagggcccgctcggcatg
gacaccctgaacacgcacctgcagacgctgttcaacccgggggacggcggcgtccgtatc
ggcgacacgcacgcccgcccgggcgacctggtcgtgcagaccaaaaacgactaccagaac
gagatcttcaacggcacggtcggcacggtcctcgacatggaaggcaacaccctcaccatc
gatttcgacagcaacgtcgtcacgctcagcggcgcggaactgtggaacctgaacctcgcg
tacgccctcaccgtccaccgcggtcagggcagcgagtggccgaccgtgctgggcgtgctg
cacgaagcgcacggccccatgctgaaccgcaacctcgcgtacaccgccctcacgcgggcg
cgcgagcggttcatcggcgtcgggtcggagagtgcgtggcgcgccgctgccacccgcgcg
cgcgacgcccggcacacgcacctgctggaacgcatccaggcgaagtaa
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