Desulfitobacterium metallireducens: DESME_11255
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Entry
DESME_11255 CDS
T03599
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dmt
Desulfitobacterium metallireducens
Brite
KEGG Orthology (KO) [BR:
dmt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmt03016
]
DESME_11255
Enzymes [BR:
dmt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DESME_11255
Transfer RNA biogenesis [BR:
dmt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DESME_11255
Prokaryotic type
DESME_11255
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AHF07514
UniProt:
W0EE76
LinkDB
All DBs
Position
complement(2200044..2200928)
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AA seq
294 aa
AA seq
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MDGVINVHKPVGMTSSDVVVWVRKHLNTRKVGHTGTLDPEVNGVLPICVGRATRLAEYLT
DQGKSYRAEITFGIVTDTQDAQGEILHSIPPEVNGDDFLKILPQFLGSIQQIPPMYSAVR
HQGKHLYDLARQGIEVVRASRTINIRRLEFISWQESDYPKAVFEVDCSKGTYIRTLCQDI
GDAMGCGAHMSKLVRLRSGPFRVEESWTLEQLSESIEQGRDDFLIPFNRVLDLPRIVLTP
ERAEAFRHGLSTSQRGLSGSTLPESGQVQVFMENEFIGIGKCNDQSLYPYKVFF
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
ttggacggagtcattaatgtacataaacctgtaggcatgacttcttctgatgttgtcgtt
tgggtgcgtaagcatctcaatactcgtaaggtgggacatactggaacgcttgacccagaa
gtgaatggagtattacccatttgtgtgggcagagctacaaggttagcagaatatctaact
gatcaaggtaaatcttatcgagccgaaatcacgtttggtattgtaaccgatacccaggac
gcgcaaggagaaatcctgcattcgatcccgcccgaggtaaatggggatgatttcttgaaa
atcctcccgcaatttttaggttctattcagcaaatcccaccgatgtattcagctgtccgt
catcagggaaagcatttatacgatttggcaaggcaaggaatagaggttgtacgtgcttct
cgcacgatcaatatccgaaggcttgaatttatttcatggcaagagagcgactatccaaag
gctgtttttgaggtggattgttcgaagggaacctatattagaacgttatgccaggacatc
ggagatgccatggggtgtggcgcccatatgtcaaaattagttcgtttacgttcaggtcca
ttccgcgtagaagaaagctggaccttagagcaactcagcgaatcgattgaacaaggaagg
gatgattttcttattccgtttaatcgtgttttggatttacccaggatagtactaactcca
gaaagggctgaggcatttcggcatggcttgtcaacatcccagagggggttgtccggctca
acgcttcctgagtcgggacaagttcaagtcttcatggaaaatgaatttattgggatcggt
aaatgcaacgaccaatccctttatccttataaagtgtttttttag
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