Desulfitobacterium metallireducens: DESME_15245
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Entry
DESME_15245 CDS
T03599
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
dmt
Desulfitobacterium metallireducens
Pathway
dmt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dmt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DESME_15245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dmt03400
]
DESME_15245
DNA repair and recombination proteins [BR:
dmt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DESME_15245
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DESME_15245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
DUF87
SWI2_SNF2
AAA_22
UB2H
DEAD_2
Microtub_bd
HEM4
AAA_16
AAA_7
Baculo_PEP_C
Motif
Other DBs
NCBI-ProteinID:
AHF08228
UniProt:
W0EFF4
LinkDB
All DBs
Position
complement(3053273..3055351)
Genome browser
AA seq
692 aa
AA seq
DB search
MEFRLHAPYQPAGDQPQAIEALVAGVLEGKRHQTLLGVTGSGKTFTMANIIEKVQRPTLI
LAHNKTLAAQLYSEFKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDEIEKL
RHSATAALFERRDVIVVASVSCIYGLGSPDEYYDLILSLRQGQEIDRNDILRKLISIQYD
RNDIAFQRGTFRVRGDIVEIYPAASTESAIRVEMFGDEIEHIYEVNVLTGEILGERQHVS
IFPNSHYVTERDKLMVACENIEAELEERLKFLKSENKLLEAQRLEQRTRYDLEMLREMGF
CNGIENYSRHITFREPGETPFTLIHYFPKDFLFMIDESHVTLPQVRGMYEGDRSRKTTLI
DYGFRLPSALDNRPLKFNEFEHLVPQRLYISATPGPYEQEHCPEVVEQIIRPTGLLDPEI
SVRPSKGQIDDLLNEIQQRIDRDERVLVTTLTKKMSEDLTDYMKNLNLAVKYLHSDITTL
DRVEILRELRLGEIDVVVGINLLREGLDLPEVSLVAILDADKEGFLRSERSLIQTIGRAA
RNSEGKVIMYADQITKSMKLAIDETNRRRTIQHAFNEEHGITPQTIRKKIYDVPEATKVA
EKKAAYGGKLPPEELESLLKSLEQEMRLAAKDMDFERAAEIRDAIIELKGEENKYKHSIQ
TRGKKRENRGTQASKAGSKTGKAKRVRNGHVS
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggagtttcgcttacatgctccctatcaacctgccggagatcagccacaggcgatagaa
gccctggtcgccggggtattagaaggaaagcgtcatcaaactctactcggggtaaccggt
tccgggaagacgtttacgatggcgaatattattgaaaaagttcagagaccaacccttatt
ttggctcataataaaacgctagccgcgcaactctatagtgagtttaaagaatttttcccg
gaaaatgccgttgagtattttgtcagttattacgattattatcaacctgaagcctatgtt
ccttcgagtgatacgtttattgaaaaagacgcttcgattaatgatgagatcgaaaagtta
cgtcactcggcgacggctgcattgtttgaacggcgggatgttatcgtagtcgccagtgtg
tcctgtatttatggcttaggctcgccggatgagtattatgatttgatcttgtcactgcgg
caaggacaggaaatcgatcgtaatgatatactccgtaaactgatctctatccaatatgac
cgtaatgatattgcatttcagcgcggaaccttccgagtgcgaggcgatatcgtcgaaatt
tatcctgccgcgtccacagaaagcgcgattcgtgtggagatgttcggcgatgaaattgag
catatttatgaagtgaatgttttaactggagaaatcctcggggaacgtcagcatgtttcc
attttcccgaattctcactatgttaccgagcgggataaattgatggtggcctgtgaaaat
attgaggcagaacttgaggaaagacttaaattcttaaaatctgaaaataagttattggaa
gcgcaacgcttggagcaacggactcggtatgaccttgagatgctccgtgaaatgggtttc
tgcaacgggattgagaactactcacgccatattacgttccgagaaccaggggaaactcct
tttactttaattcattatttcccgaaggactttttatttatgatcgacgagtctcatgtg
accttacctcaggtgcgaggtatgtatgaaggagaccgctctcgtaagacaacgttgatt
gattatggttttcggttaccttcagccttagataaccggccgcttaagtttaatgagttt
gaacacttggttccccaacggttgtatatcagtgcaactcctggaccttatgaacaggag
cattgtcctgaagttgtcgagcagatcattcggccgacaggacttcttgatccagaaatc
tcggttcgcccctcgaaaggtcagatcgatgatttgttaaatgagattcagcagcgcatc
gaccgtgatgagcgagttttagtgacaacgttgactaagaaaatgtcggaagacttaacc
gactatatgaaaaatctgaacctagcggttaagtatctccactcagatattaccactctt
gacagggttgagattcttcgcgaacttcgacttggggaaattgatgtggttgttggaatt
aacctcctccgtgagggtctggatttaccggaagtctctttagtggctattttggatgcg
gacaaggaagggtttttacgttctgaacgttctttgatccagacgattggacgggcagct
cggaattcagaaggtaaggtcattatgtacgctgaccaaatcacgaaatcgatgaaatta
gccattgacgaaacaaatcggcgtcgtacgattcaacatgcttttaatgaagaacatggg
attaccccgcaaacgattcgcaagaaaatatatgacgttccggaagcaacaaaggtcgcg
gagaaaaaagcagcatatggaggtaagcttcctcctgaagaattggaatcgcttcttaaa
agcctggaacaagaaatgcgcttagctgctaaggacatggattttgagcgggcggcagaa
atccgggatgcgattattgaactcaaaggggaagaaaataagtataagcattccatacag
actcggggcaagaaacgtgagaaccgcgggactcaagcgagcaaagcgggcagtaaaacg
ggcaaggctaagagagtgaggaatggtcatgtttcatga
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