Dehalococcoides mccartyi CG4: X793_06680
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Entry
X793_06680 CDS
T03648
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
dmy
Dehalococcoides mccartyi CG4
Brite
KEGG Orthology (KO) [BR:
dmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmy03016
]
X793_06680
Enzymes [BR:
dmy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
X793_06680
Transfer RNA biogenesis [BR:
dmy03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
X793_06680
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AII59988
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All DBs
Position
1232457..1233038
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AA seq
193 aa
AA seq
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MTEGLIRTFIALELPPELKTRLAGLRNALPIPSQAVKWVNPESMHLTIKFLGDTPLSQIP
NIIKGLEKAAQVCHAFTLSTTRIGAFPSLSSPKVIWLGLDGEIEKLNTLFAEVEKNISGL
GFPAEKRDFAPHLTLGRLKEGAAKSDLQTAAESLKTAPPVPKTSFKASHICLFKSQLLPA
GPVYTRLAQISLA
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgaaggacttatccgcacctttattgctctagaactgccgccggagctaaaaacc
agactcgccggtctccggaatgcattacccataccctcacaagctgtcaaatgggtaaac
cccgaatcaatgcatctgactatcaaattcctgggggataccccgttaagccaaataccc
aatatcataaagggtctggagaaagccgcacaggtctgccacgcctttactttatccacc
acccgcataggggctttcccctcactttcaagccccaaggtaatctggctggggctggat
ggtgagatagaaaaactaaataccctctttgcggaggttgaaaaaaatatttcagggctg
ggttttccggcagaaaaacgggattttgctccccacctaactctggggcgtcttaaggag
ggggctgcaaaaagtgacctgcaaaccgctgccgaatcacttaaaaccgcaccccccgtt
cctaaaaccagtttcaaagcctcgcatatctgtctctttaaaagccagcttttacccgcc
gggccggtatacaccagactggcccaaatcagcctcgcctag
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