Dokdonia sp. MED134: MED134_01790
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Entry
MED134_01790 CDS
T03275
Name
(GenBank) radical SAM superfamily protein
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
dok
Dokdonia sp. MED134
Brite
KEGG Orthology (KO) [BR:
dok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dok03009
]
MED134_01790
Enzymes [BR:
dok01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
MED134_01790
Ribosome biogenesis [BR:
dok03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MED134_01790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
EAQ38687
LinkDB
All DBs
Position
complement(1243314..1244354)
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AA seq
346 aa
AA seq
DB search
MKTEKKDIRKLTKEDLRAFFVDQGDKAFRGNQVYEWLWQKGAHDFVDMTNISKETRILLD
EHFVINHIRVDQMQRSSDGTIKNAVKLHDGLTVESVLIPTKSRTTACVSSQVGCSLNCKF
CATARLKRMRNLNPDEIVDQVVVIDRQSKLYHDRPLSNIVFMGMGEPLMNYNNVIKAIDK
ITDPEGLGMSPKRITVSTSGVPKIIKKMADEEVKFNLAVSLHSALDDVRTEIMPFNEQMP
LADLKEALIYWYEKTGKRITYEYVVWDGINDRQIDIDALLDFCKAVPSKVNIIEYNPIDD
GQFQQANPQAIDRYVDVLEANGVTVTVRRSRGKDIDAACGQLANKQ
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaacagaaaagaaagacatacgtaaattaaccaaagaagatcttagagcttttttt
gtagaccaaggtgataaagcctttagaggtaatcaggtttatgagtggttatggcaaaag
ggcgcacacgactttgtagatatgactaacatttcaaaggagacacgcatcttgctagat
gagcattttgtgattaaccatatacgtgttgaccagatgcaacgtagtagtgatggtact
ataaagaacgctgtaaagctgcacgatggtcttacggttgagtctgttttaatacctact
aagagtaggacaaccgcctgtgtgtcttcacaagtaggttgtagtcttaattgcaaattt
tgtgcgacagctagattaaagagaatgcgtaatctcaacccagatgagatcgtagatcaa
gtagttgtgatagatagacaaagtaagttatatcacgatagacccctgtctaacattgtt
tttatggggatgggagagccattaatgaattataataatgtgattaaggctatagataag
atcacagatccagaaggactaggtatgtcacctaagagaattacagtctctacctctggt
gtgcctaagattattaaaaaaatggcagatgaagaggtgaagtttaatcttgctgtatcg
ctgcactctgcactagatgatgtacgtacagagattatgccctttaatgagcaaatgcca
ctcgcagatctcaaagaagcacttatttactggtatgaaaaaactggaaagcgcattacg
tatgagtatgtagtttgggatggcataaatgatagacagatagatatagatgctttatta
gatttttgtaaagcagtgcctagtaaagtaaatatcatagagtataaccctatagatgat
ggtcagtttcaacaagcaaaccctcaagctatagaccgttatgtagatgtgcttgaagca
aatggtgtcacagtaaccgtgagaagatcacgaggtaaagatatagatgccgcttgcgga
caactggcaaataagcaataa
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