Marivivens sp. JLT3646: BSK21_02885
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Entry
BSK21_02885 CDS
T04589
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
don
Marivivens sp. JLT3646
Pathway
don03030
DNA replication
don03410
Base excision repair
don03420
Nucleotide excision repair
don03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
don00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSK21_02885
03410 Base excision repair
BSK21_02885
03420 Nucleotide excision repair
BSK21_02885
03440 Homologous recombination
BSK21_02885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
don03032
]
BSK21_02885
03400 DNA repair and recombination proteins [BR:
don03400
]
BSK21_02885
Enzymes [BR:
don01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSK21_02885
DNA replication proteins [BR:
don03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BSK21_02885
DNA repair and recombination proteins [BR:
don03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BSK21_02885
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSK21_02885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Peptidase_M32
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
APO86077
UniProt:
A0AA34SBY4
LinkDB
All DBs
Position
558691..561498
Genome browser
AA seq
935 aa
AA seq
DB search
MSGFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPVGAVSGFVNMLQRYVEGNSGPDA
ATHVAVIFDYSGKTFRNDLYDKYKANRPPAPEDLIPQFPLTREATRAFNIACHEIEGYEA
DDIIATLSCQARELGGRVTIVSSDKDLMQLVGGGVEMLDPMKNKRIDSDGVVEKFGVGPE
RVVDVQALAGDSVDNVPGAPGIGLKTAALLIDEYGDLETLLDRAGEIKQPKRRETLIDNR
AQIELSKQLVQLDCNTPLDFSIDDLEIRDPEAEKLLAFLSAMEFRSVSKRIADKMGVDSP
VIPDTTPEGADPIAADMPAQLPFDHEKYECVRDAGALQAWVARAYDRGYIAFDTETTGLD
EMVVDLVGVSLCVTAGEACYIPLTHKSSAADDLFGGAELAAGQMNLEEAIAILKPMLEDP
SILKIGQNIKYDAKILSRYGVQVAPIDDTMLMSYALNAGLHGHGMDALSERYLSHNPIEI
KSLLGSGKSMITFDRVPVDDAVKYAAEDADITLRLWQLFKPQLTQKKVTTVYETLERPLV
PVLARMEQAGVKVDRDTLSRMSNAFAQKMAALEDEIKTTAGMEFNVGSPKQLGEVLFDHL
GLPGGKKGKTGAYATGADILEDLATEHELPRLVLDWRQLSKLKSTYTDALQNHINADTGR
VHTSYLQTGANTGRLASTDPNLQNIPVRSEEGRRIREAFVAEEGKVIVSLDYSQIELRIL
AHVAGIETLKQAFRDGHDIHAMTASEMFDVPLDQMTSDIRRQAKAINFGVIYGISGFGLA
RNLRIPRAEAQGFIDRYFERFPGIRAYMDDTVAFAKEHSYVETLFGRKIHTPEINAKGPT
AGFAKRAAINAPIQGTAADVIRRAMVRMDDAIADLPAKMLLQVHDELIFEVEKGSEDALI
ERAREVMENAADPAVKLDVKLSVDAGVGANWAEAH
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggttcggaaaaggctgtcacctccatcttattgatggatcggcgtttatcttt
cgcgcgtaccatgcgctgccccctttaacccgcaaatcggacggccttcctgttggtgcc
gtcagtggatttgtgaacatgcttcaacgctatgtcgaggggaattctggtcccgatgca
gccacccacgtcgcagtaatctttgattattcgggcaaaaccttccgcaatgatctctac
gacaaatacaaggcaaaccgtccgcccgcgcccgaagacctgatcccacagttccccctg
acccgtgaggcgacacgagcgttcaacatcgcatgccatgaaatcgaaggctacgaggcc
gacgatatcatcgcgacgctgtcctgtcaggcgcgtgaattgggcggccgcgtcaccatc
gtgtcctcggacaaggacctcatgcagttggtcggcggcggtgtcgaaatgctcgacccg
atgaagaacaaacgcatcgacagcgatggcgtggtcgagaaattcggcgtcggcccagag
cgcgtcgtcgatgtgcaggcgcttgcgggcgatagcgtcgataacgtgccgggtgcaccc
gggatcggcctgaaaaccgcggcccttttgatcgacgaatacggtgatctcgaaaccctt
ctggaccgcgcgggtgaaattaaacagccgaaacgccgcgagaccctgatcgacaaccgc
gcgcagattgaactgtcgaaacaactggtgcagttggactgcaacacgcccttggatttc
agcatcgacgatctggaaatccgtgatcccgaggccgagaaactcttggccttcctctcc
gcaatggagttccgctccgtgtcaaaacggatcgcggacaagatgggcgtcgacagtccc
gtgatccctgacaccacccccgaaggcgcggacccaatcgcggcggacatgccggcgcag
ttgccctttgatcatgagaaatatgaatgtgtccgcgacgcaggggcgttacaggcctgg
gtcgcccgtgcctatgatcgcggctatatcgcctttgatacagagacgacgggcctagat
gagatggtcgtggacctcgtcggtgtatcgctctgcgttacagcgggcgaggcctgttat
attcctctcactcataaatcctctgcggcggatgacctctttgggggtgctgaacttgcc
gcgggtcagatgaatttggaagaggctatcgcgatcctcaaaccgatgcttgaggaccct
tccatcctcaaaatcggccagaacatcaaatacgatgccaaaatactgagccgctacggc
gtacaggtcgcgcccatcgacgacacgatgctgatgtcctatgcgctgaacgcggggctc
cacggtcatgggatggatgcgctgtccgaacgttatctgtcccacaacccgatcgagatc
aaatcgctcttggggtcgggtaaatccatgatcaccttcgatcgggtgcccgtcgatgat
gctgtgaaatatgcagccgaggacgctgatatcaccctacgcctctggcaattgttcaaa
ccgcaactgacccagaaaaaagtcacaaccgtctacgaaacgttagagcgtccactggtc
cccgtcctcgctcggatggaacaagcaggcgtaaaagttgatcgcgatacgctgtcccgc
atgtccaacgcctttgcccagaaaatggcagcgcttgaggacgaaattaaaacgacagcg
ggcatggaatttaacgtcggctcacccaaacaattgggtgaagtcctctttgaccacctc
ggccttccggggggaaagaaaggcaagacgggcgcctatgctaccggtgctgacatcctc
gaagacctcgccacggaacacgaactgccgcgcttggttctcgactggcgtcagctctcg
aaactgaaatcgacctacacggacgccctgcaaaaccacatcaacgcggacacagggcgt
gtgcacacgtcctacctgcaaacgggtgcgaacacggggcggttggcctcgaccgacccg
aacctgcaaaacatccccgtccgtagcgaagaaggccgccgtatccgcgaagcctttgtc
gcagaagaaggcaaggtcatcgtttcgctcgactatagccaaatcgaactgcgcattctg
gcgcatgtggcggggatcgaaaccctgaaacaagccttccgcgacggccatgacatccac
gcaatgaccgcatctgaaatgttcgatgtgccgctggaccagatgacctcggacatccgc
cgtcaggccaaggcgatcaacttcggtgtgatctacggcatctcgggttttggtcttgcg
cgcaatttgcgtatcccacgggccgaggcgcaagggttcatcgaccgatatttcgaacgc
ttccccggcatccgcgcttacatggacgacaccgtcgcctttgccaaagagcacagttat
gttgaaacgctctttggccgaaaaatccatacgccagaaatcaacgccaaaggcccgact
gctggctttgccaaacgtgccgccatcaacgccccgatccaaggcaccgccgccgatgtg
atccgccgcgctatggtgcggatggacgacgctatcgccgatctgccagcaaagatgctc
cttcaggtccacgacgaactcatctttgaggtcgaaaaagggtccgaggacgctctgatc
gaacgggcccgcgaggtgatggaaaatgcggccgatcctgcggtgaagctcgacgttaaa
cttagcgtcgatgcaggcgttggcgcgaattgggccgaggcgcactaa
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