Marivivens sp. JLT3646: BSK21_12305
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Entry
BSK21_12305 CDS
T04589
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
don
Marivivens sp. JLT3646
Pathway
don03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
don00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BSK21_12305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
don03400
]
BSK21_12305
DNA repair and recombination proteins [BR:
don03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSK21_12305
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BSK21_12305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
UB2H
AAA
DUF87
eIF3_p135
AAA_7
Motif
Other DBs
NCBI-ProteinID:
APO87741
UniProt:
A0AA34SF89
LinkDB
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Position
complement(2465847..2468111)
Genome browser
AA seq
754 aa
AA seq
DB search
MSADDCSPLEGEQKEDIIRADTGAPMHNNNPQDMPMLHRAPQQREKLEGGKRFVMSTEFE
PAGDQPTAIAELSTGILQGERDQVLLGATGTGKTFTMAKVIEETQRPAIILAPNKTLAAQ
LYGEFKGFFPDNAVEYFVSYYDYYQPEAYVPRSDTYIEKESQINEQIDRMRHSATRALLE
RDDVIIVASVSCIYGIGSVETYSAMTQDLFAGKMYDQRQVMADLVAQQYRRNDAAFQRGC
FRVRGDSLEIWPAHLDDRAWRLSFFGEELEVIHEFDPLTGEKTDTFDKVRIYANSHYVTP
RPTMQQAIKGIKEELQVRLKQLQDEGKLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRY
LTGRAPGEPPPTLFEFIPDNAIVFADESHVSVPQIGGMYKGDYRRKFTLAEHGFRLPSCM
DNRPLKFEEWDAMRPQSIYVSATPAAWELEQTGGVFTEQIIRPTGLLDPVVEIRPVEMQV
DDLLDEVRKVAAEGYRTLCTTLTKRMAEDLTEYMHEQGIRVRYMHSDIDTIERIEILRDL
RLGAFDVLIGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQTIGRAARNAEGRVIM
YADRITGSMERALGETERRRVRQMAYNEEHGITPQTVKKNVDDILAGLYKGDTDQSRVTA
TIDKPLHGGNLEAVLEGLRNDMRKAAENLEFEEAARLRDEVKRLETVDLVISDDPLARQS
AVDDAVEESRKASGRSSAGRAGQRGGNKRSRKSR
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagatgattgctccccccttgaaggtgaacaaaaagaggacattataagggcc
gacacaggagccccgatgcacaacaacaacccccaagacatgccaatgttgcaccgcgcg
ccgcaacagcgcgaaaagctggaaggcggcaaacggtttgtcatgagcacagagttcgaa
cccgccggcgaccagcccacggcgattgcggagctgtcgacgggtattttgcagggcgaa
cgcgatcaggttctgctcggggcgacgggtacgggtaagacattcacgatggccaaggtg
attgaggaaacgcagcgccctgcgattatcctcgccccaaacaaaacgctcgccgcgcag
ctttatggggagttcaaagggttcttccctgacaacgccgtcgaatatttcgtgtcctat
tacgattattaccagccagaggcctatgtgccgcggtcggacacctatatcgagaaagag
agccaaattaacgaacagatcgaccgtatgcgccactcggccacgcgggcactgttggag
cgggacgatgttatcatcgtggcgtccgtctcatgtatctacggtatcggttcggttgaa
acctattcggccatgacgcaggatctgttcgcgggcaaaatgtatgaccagcgtcaggtg
atggcggaccttgtggcgcagcaatatcggcgcaatgatgcggcgttccagcggggatgt
ttccgtgtgcgcggtgacagcctagaaatttggccagctcacttggatgatcgggcatgg
cggctgtcgttctttggtgaagagcttgaggttattcacgaatttgacccgctcaccggc
gagaaaaccgatactttcgataaggtaagaatttacgcaaacagccactatgtgaccccg
cgcccaacgatgcagcaggcgatcaagggtattaaagaagagctccaagtccggctgaag
caattgcaggacgaggggaaactgctggaggcgcagcgccttgagcagcggacaaacttt
gacctcgagatgctcgaggcgacgggtgtctgcaatggcatcgaaaactattcgcggtat
ctgacgggccgtgccccgggcgagccaccgccaacgctgttcgaatttatccccgacaac
gcgatcgtttttgccgacgaaagccacgtttccgtgccacaaatcggcggcatgtataag
ggtgactatcgccgcaaattcacgctggcagagcacgggttccgcctgccgtcctgtatg
gataaccgcccgctcaagttcgaagaatgggacgcgatgcgcccgcagtcgatctatgtg
tcggcgacgcctgccgcatgggagctggaacaaacggggggtgtctttaccgaacagatc
attcgtccgacgggcctccttgatccagtcgtcgaaatccgccctgttgagatgcaggtc
gatgacctcttggacgaagtgcgcaaggtcgctgccgaaggttatcggacgctctgcacc
acgctgaccaaacgcatggccgaagacctgaccgaatacatgcacgaacaaggtattcgc
gtgcgctacatgcactcggacattgatacgattgaacggatcgaaatcttgcgcgaccta
cgtttgggagcctttgacgtcctgatcgggatcaaccttttgcgtgaggggctcgatatt
cctgaatgtgggttggttgcgatcctcgatgcggacaaagagggcttcttgcgctctgaa
acctcgctcatccagaccatcggtcgtgcggcgcggaacgccgaaggccgcgtgatcatg
tatgcggatcggatcacggggtcgatggaacgggcgctgggcgaaaccgaacgccgccgt
gtccgtcagatggcctacaatgaggagcacgggatcacgccgcagacggtcaaaaagaac
gtcgatgacattcttgcaggcctctacaaaggcgacacggatcaatcccgcgtgacggct
acgatcgacaaaccgctccatggcgggaaccttgaggcggttctagaagggttgcgcaat
gatatgcgcaaagccgctgaaaacctcgaattcgaagaggcagcccgtctgcgcgatgaa
gtcaaacggctagagacggtcgatctggtgatttccgacgacccattggcccgtcagtcc
gcagtcgacgatgcggtcgaagaaagccgtaaggcttcggggcggtcatcagctggccgc
gcgggtcagcgcggtggcaacaaacgtagtcgcaagtcgcgctag
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