KEGG   Marivivens sp. JLT3646: BSK21_12305
Entry
BSK21_12305       CDS       T04589                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
don  Marivivens sp. JLT3646
Pathway
don03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:don00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BSK21_12305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:don03400]
    BSK21_12305
DNA repair and recombination proteins [BR:don03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BSK21_12305
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BSK21_12305
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 Kinesin UB2H AAA DUF87 eIF3_p135 AAA_7
Other DBs
NCBI-ProteinID: APO87741
UniProt: A0AA34SF89
LinkDB
Position
complement(2465847..2468111)
AA seq 754 aa
MSADDCSPLEGEQKEDIIRADTGAPMHNNNPQDMPMLHRAPQQREKLEGGKRFVMSTEFE
PAGDQPTAIAELSTGILQGERDQVLLGATGTGKTFTMAKVIEETQRPAIILAPNKTLAAQ
LYGEFKGFFPDNAVEYFVSYYDYYQPEAYVPRSDTYIEKESQINEQIDRMRHSATRALLE
RDDVIIVASVSCIYGIGSVETYSAMTQDLFAGKMYDQRQVMADLVAQQYRRNDAAFQRGC
FRVRGDSLEIWPAHLDDRAWRLSFFGEELEVIHEFDPLTGEKTDTFDKVRIYANSHYVTP
RPTMQQAIKGIKEELQVRLKQLQDEGKLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRY
LTGRAPGEPPPTLFEFIPDNAIVFADESHVSVPQIGGMYKGDYRRKFTLAEHGFRLPSCM
DNRPLKFEEWDAMRPQSIYVSATPAAWELEQTGGVFTEQIIRPTGLLDPVVEIRPVEMQV
DDLLDEVRKVAAEGYRTLCTTLTKRMAEDLTEYMHEQGIRVRYMHSDIDTIERIEILRDL
RLGAFDVLIGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQTIGRAARNAEGRVIM
YADRITGSMERALGETERRRVRQMAYNEEHGITPQTVKKNVDDILAGLYKGDTDQSRVTA
TIDKPLHGGNLEAVLEGLRNDMRKAAENLEFEEAARLRDEVKRLETVDLVISDDPLARQS
AVDDAVEESRKASGRSSAGRAGQRGGNKRSRKSR
NT seq 2265 nt   +upstreamnt  +downstreamnt
atgtcagcagatgattgctccccccttgaaggtgaacaaaaagaggacattataagggcc
gacacaggagccccgatgcacaacaacaacccccaagacatgccaatgttgcaccgcgcg
ccgcaacagcgcgaaaagctggaaggcggcaaacggtttgtcatgagcacagagttcgaa
cccgccggcgaccagcccacggcgattgcggagctgtcgacgggtattttgcagggcgaa
cgcgatcaggttctgctcggggcgacgggtacgggtaagacattcacgatggccaaggtg
attgaggaaacgcagcgccctgcgattatcctcgccccaaacaaaacgctcgccgcgcag
ctttatggggagttcaaagggttcttccctgacaacgccgtcgaatatttcgtgtcctat
tacgattattaccagccagaggcctatgtgccgcggtcggacacctatatcgagaaagag
agccaaattaacgaacagatcgaccgtatgcgccactcggccacgcgggcactgttggag
cgggacgatgttatcatcgtggcgtccgtctcatgtatctacggtatcggttcggttgaa
acctattcggccatgacgcaggatctgttcgcgggcaaaatgtatgaccagcgtcaggtg
atggcggaccttgtggcgcagcaatatcggcgcaatgatgcggcgttccagcggggatgt
ttccgtgtgcgcggtgacagcctagaaatttggccagctcacttggatgatcgggcatgg
cggctgtcgttctttggtgaagagcttgaggttattcacgaatttgacccgctcaccggc
gagaaaaccgatactttcgataaggtaagaatttacgcaaacagccactatgtgaccccg
cgcccaacgatgcagcaggcgatcaagggtattaaagaagagctccaagtccggctgaag
caattgcaggacgaggggaaactgctggaggcgcagcgccttgagcagcggacaaacttt
gacctcgagatgctcgaggcgacgggtgtctgcaatggcatcgaaaactattcgcggtat
ctgacgggccgtgccccgggcgagccaccgccaacgctgttcgaatttatccccgacaac
gcgatcgtttttgccgacgaaagccacgtttccgtgccacaaatcggcggcatgtataag
ggtgactatcgccgcaaattcacgctggcagagcacgggttccgcctgccgtcctgtatg
gataaccgcccgctcaagttcgaagaatgggacgcgatgcgcccgcagtcgatctatgtg
tcggcgacgcctgccgcatgggagctggaacaaacggggggtgtctttaccgaacagatc
attcgtccgacgggcctccttgatccagtcgtcgaaatccgccctgttgagatgcaggtc
gatgacctcttggacgaagtgcgcaaggtcgctgccgaaggttatcggacgctctgcacc
acgctgaccaaacgcatggccgaagacctgaccgaatacatgcacgaacaaggtattcgc
gtgcgctacatgcactcggacattgatacgattgaacggatcgaaatcttgcgcgaccta
cgtttgggagcctttgacgtcctgatcgggatcaaccttttgcgtgaggggctcgatatt
cctgaatgtgggttggttgcgatcctcgatgcggacaaagagggcttcttgcgctctgaa
acctcgctcatccagaccatcggtcgtgcggcgcggaacgccgaaggccgcgtgatcatg
tatgcggatcggatcacggggtcgatggaacgggcgctgggcgaaaccgaacgccgccgt
gtccgtcagatggcctacaatgaggagcacgggatcacgccgcagacggtcaaaaagaac
gtcgatgacattcttgcaggcctctacaaaggcgacacggatcaatcccgcgtgacggct
acgatcgacaaaccgctccatggcgggaaccttgaggcggttctagaagggttgcgcaat
gatatgcgcaaagccgctgaaaacctcgaattcgaagaggcagcccgtctgcgcgatgaa
gtcaaacggctagagacggtcgatctggtgatttccgacgacccattggcccgtcagtcc
gcagtcgacgatgcggtcgaagaaagccgtaaggcttcggggcggtcatcagctggccgc
gcgggtcagcgcggtggcaacaaacgtagtcgcaagtcgcgctag

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